PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026440022.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 495aa MW: 56273.3 Da PI: 6.4522

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026440022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	73.4	3.8e-23	120	223	1	86
trihelix 1 rWtkqevlaLiearremeerlrr.gk................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsesss 77 +Wt+++v++Li ++ +++++ + g+ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ ++++++ XP_026440022.1 120 KWTDNMVRLLIMVVYYVGDDAGPeGNdltgggnckkksggllQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDIIGKGtACRVVE 214 7************999998852447777888899999999********************************************5599999 PP trihelix 78 tcpyfdqle 86 + ++++ l+ XP_026440022.1 215 NQALLETLD 223 999999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MGSGMLGLEI PIHHPHHPHH QHPHPHQQQQ QQQQPQHPFA NHLQQQQQPH HLVSFGVGGH 60 EADPHNQSQQ ALKQNAHAYS NKSKQPQQVA ISDEDEPGFA GEDGGGADGR KRVSPWQRVK 120 WTDNMVRLLI MVVYYVGDDA GPEGNDLTGG GNCKKKSGGL LQKKGKWKSV SRAMMEKGFY 180 VSPQQCEDKF NDLNKRYKRV NDIIGKGTAC RVVENQALLE TLDHIPPKLK EEVKKLLNSK 240 HLFFREMCAY HNSGGGGGGG IASGGAHQIP DVAVESSQHH QQDRCFHSSQ GAAANGNSRA 300 RADLEGLKMV NKRGVSHEEE EDEDVEDEDD GDEDEEEDEE EDEETEDGGK SHKMQGAGHD 360 DEDDDEKMVR KKRQRRGTFP SVSPSIQQLS CELMNVLQDG SKNPWEQRQW MRTRTVQLEE 420 QRVSYQCQAF ELEKQRLKWL RFSGKKEREL ERMKLNNERL RLENDRMVLL LRQKELELVD 480 LHQQQHSSSK PTSMN

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MGSGMLGLEI PIHHPHHPHH QHPHPHQQQQ QQQQPQHPFA NHLQQQQQPH HLVSFGVGGH  60
EADPHNQSQQ ALKQNAHAYS NKSKQPQQVA ISDEDEPGFA GEDGGGADGR KRVSPWQRVK  120
WTDNMVRLLI MVVYYVGDDA GPEGNDLTGG GNCKKKSGGL LQKKGKWKSV SRAMMEKGFY  180
VSPQQCEDKF NDLNKRYKRV NDIIGKGTAC RVVENQALLE TLDHIPPKLK EEVKKLLNSK  240
HLFFREMCAY HNSGGGGGGG IASGGAHQIP DVAVESSQHH QQDRCFHSSQ GAAANGNSRA  300
RADLEGLKMV NKRGVSHEEE EDEDVEDEDD GDEDEEEDEE EDEETEDGGK SHKMQGAGHD  360
DEDDDEKMVR KKRQRRGTFP SVSPSIQQLS CELMNVLQDG SKNPWEQRQW MRTRTVQLEE  420
QRVSYQCQAF ELEKQRLKWL RFSGKKEREL ERMKLNNERL RLENDRMVLL LRQKELELVD  480
LHQQQHSSSK PTSMN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	3e-51	Trihelix family protein