PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026439471.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 349aa MW: 38109.9 Da PI: 6.9353

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026439471.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00085	144	166	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+Fs+ L H +H XP_026439471.1 144 YECKTCNKCFSSFQALGGHRASH 166 99**********99999998887 PP
2	zf-C2H2	13.4	0.00023	246	268	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H XP_026439471.1 246 HECSICGSEFSSGQALGGHMRRH 268 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MEVVNNNQED QTLMGSNEYL HVVKGKRTKR QRPLSPLTLP AMTTSTSSSG GGGDEKGDNN 60 NFPSPTTSVE FSVISSEEEE DMANCLILLA QGGHKRSKQI DDDYVDDENS KMARINSRRF 120 YNDAAAATTS KAAGVGAGAE LYLYECKTCN KCFSSFQALG GHRASHKRPN NKGMCNEETT 180 KTAITKTSSL LMLTEQESPQ HHQFNDNTNN NNNIANSTTC ARPSLVLQMG NSSSLSAFNN 240 NKSRVHECSI CGSEFSSGQA LGGHMRRHRT TNATTATTST NIDFSHHQDD QLNFSNKKAA 300 ARNVLSLDLN LPAPEEDYSS KFGLFSSSKQ QPQQQPLVFS ASALVDCHY

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MEVVNNNQED QTLMGSNEYL HVVKGKRTKR QRPLSPLTLP AMTTSTSSSG GGGDEKGDNN  60
NFPSPTTSVE FSVISSEEEE DMANCLILLA QGGHKRSKQI DDDYVDDENS KMARINSRRF  120
YNDAAAATTS KAAGVGAGAE LYLYECKTCN KCFSSFQALG GHRASHKRPN NKGMCNEETT  180
KTAITKTSSL LMLTEQESPQ HHQFNDNTNN NNNIANSTTC ARPSLVLQMG NSSSLSAFNN  240
NKSRVHECSI CGSEFSSGQA LGGHMRRHRT TNATTATTST NIDFSHHQDD QLNFSNKKAA  300
ARNVLSLDLN LPAPEEDYSS KFGLFSSSKQ QPQQQPLVFS ASALVDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	4e-44	C2H2 family protein