PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026439038.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 482aa    MW: 53965.5 Da    PI: 6.5049
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026439038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26026.22.2e-08689191
          DUF260  1 aCaaCkvlrrkCakdCvlapyfpa.eqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
                    +C aCk++rr C+++C++ + f    +  +f++           ++ ++ ++ e +++ s+l++eA+a +++Pv Ga+g++l+l+q+++++ 
  XP_026439038.1  6 QCLACKFMRRPCSEGCPYIQLFSTyFDVPSFQI-------GYAAST-ADRQKIEARITDSTLTFEANAGVNEPVFGATGILLALHQRMREEV 89
                    6*****************999965233444443.......333333.3336667789999*************************9998765 PP
2DUF26040.58e-13125229199
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkf..anvhklFGasnvlkllkal....peeeredamsslvyeAearardPvyGavgvilklqqqleq 89 
                     aC aC +l + C+ dC++ p f a+++++f  ++   l G + vl   ++l    + ++  +++++l +e++ar++dPvyG +g+il+l ++  +
  XP_026439038.1 125 ACPACTYLPQMCKVDCPFVPFFEARKSRDFirEFCTVLCGSTVVLPDHSNLqsadELNKAGITAKALEFESKARVHDPVYGIAGIILSLYKNWWN 219
                     6************************99998556788889998887555555221233446899****************************9999 PP

          DUF260  90 lkaelallke 99 
                     l++++ ll++
  XP_026439038.1 220 LNHHVRLLEQ 229
                     9998887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 482 aa     Download sequence    
MGDHGQCLAC KFMRRPCSEG CPYIQLFSTY FDVPSFQIGY AASTADRQKI EARITDSTLT  60
FEANAGVNEP VFGATGILLA LHQRMREEVT RFETITGKGV NVIPADTMNH FVLKDSEKIE  120
QKHRACPACT YLPQMCKVDC PFVPFFEARK SRDFIREFCT VLCGSTVVLP DHSNLQSADE  180
LNKAGITAKA LEFESKARVH DPVYGIAGII LSLYKNWWNL NHHVRLLEQR HRSVQNFPTV  240
QIGSCNIPTD KGKGNVTPES TNERCTIAEW MDMEDDDESL YSREEVSKNY MEFQQEVALI  300
QPLPQERTYS LCLPQGESSK SSPLSSVPHQ MNQPLADQQL YRVPQQTQQL LSQQAASSSL  360
REAPSSQQGM SSTTGEAINR AWQNLTRQER EELLRQTWNR LPGTSHVQNL LQRFPDRPSV  420
QDILQRTSER VPHSVTPQLQ QQLASPSYGQ QAASSSLRAA TSSQQGTSSS TGTPPTSTTD  480
TI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45410.13e-08LBD family protein