PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026438779.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 496aa MW: 54557.7 Da PI: 7.8096

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026438779.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	43	1.2e-13	126	213	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +Li+a e+ +l+rg+lk+++W++v++ + ++ +++ +qCk++++ l+k+yk +k+ ++ + ss++ ++++l+ XP_026438779.1 126 CWSEGATSTLIDAWGERYLELSRGNLKQKHWKDVAEIVtsrdDYTKSSKTDVQCKNRIDTLKKKYKIEKNKISD--TGFSSKWCFYERLD 213 7***********************************85444445566778************999998..58999*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MEVEEDEIES HHPSQSPSQS LTSSPSPPPS PTTNHPQASP PPQQPEPEPE PPLSQSPSPI 60 SSIQPQSHQQ KQEQTDSPPP TTPPPPPQTL TLALPIQQPP LSTATNTPPP PAAAAAQHHS 120 HGREDCWSEG ATSTLIDAWG ERYLELSRGN LKQKHWKDVA EIVTSRDDYT KSSKTDVQCK 180 NRIDTLKKKY KIEKNKISDT GFSSKWCFYE RLDHLIGPNS AAAANNNSNS TSNKHVNTPV 240 PSNTTPAPIQ FHNLSGSGSG SGSGGGGGGT GKVPLAVPVH LVRYDHPSLN LNLNHQQQHQ 300 QQQQHYQQQQ QQRRKNAGYA VETDSSGEEP VYDDESPNST DSLPPETDYV RKRPRLFARR 360 ACPTPSTNSM PVRGGGGSFR GEKNRSSGKK RGSSSGGGGE SGNWKNSIME LTRAIVKFGE 420 AYEQIETSKL QQVLEMEQQR MEFMKELELQ RMQFFMKTQV DLSQVKHGRR GGNSRRHNNN 480 NSNNHNNNID NGDNSG

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MEVEEDEIES HHPSQSPSQS LTSSPSPPPS PTTNHPQASP PPQQPEPEPE PPLSQSPSPI  60
SSIQPQSHQQ KQEQTDSPPP TTPPPPPQTL TLALPIQQPP LSTATNTPPP PAAAAAQHHS  120
HGREDCWSEG ATSTLIDAWG ERYLELSRGN LKQKHWKDVA EIVTSRDDYT KSSKTDVQCK  180
NRIDTLKKKY KIEKNKISDT GFSSKWCFYE RLDHLIGPNS AAAANNNSNS TSNKHVNTPV  240
PSNTTPAPIQ FHNLSGSGSG SGSGGGGGGT GKVPLAVPVH LVRYDHPSLN LNLNHQQQHQ  300
QQQQHYQQQQ QQRRKNAGYA VETDSSGEEP VYDDESPNST DSLPPETDYV RKRPRLFARR  360
ACPTPSTNSM PVRGGGGSFR GEKNRSSGKK RGSSSGGGGE SGNWKNSIME LTRAIVKFGE  420
AYEQIETSKL QQVLEMEQQR MEFMKELELQ RMQFFMKTQV DLSQVKHGRR GGNSRRHNNN  480
NSNNHNNNID NGDNSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	3e-40	Trihelix family protein