PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026438327.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | SBP | ||||||||
Protein Properties | Length: 783aa MW: 87850.9 Da PI: 7.1664 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 116.3 | 1.6e-36 | 118 | 194 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv+gCe+d+se+k yhrrh+vC ++++a++v+++g+++r+CqqC++fh l +fDe+krsCrr+L++hn+rrr+k+ XP_026438327.1 118 CCQVPGCEVDISELKGYHRRHRVCLTCANASSVFLDGETKRYCQQCGKFHILPDFDEGKRSCRRKLERHNKRRRRKA 194 6*************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 783 aa Download sequence |
MDPQNQLLDE NWEWNSLLDF NVDDSLNISW SNEFNQIDPS PPPEESNSHH NNQTGHGSDE 60 SDNNRVRKRD PRLTCENFLA GIIPCSCPEV DEKLLLEEEE KQAMKKRSRT STASSTICCQ 120 VPGCEVDISE LKGYHRRHRV CLTCANASSV FLDGETKRYC QQCGKFHILP DFDEGKRSCR 180 RKLERHNKRR RRKADSKSVG GKESQEGVIA DDLAGEGEAG KDSIPVSSHT VEEAAPESED 240 GRVSPLSSIP SSQSQDIRSA ASGETRKEPR KDNSTLTLSS SFGDDKSAYS SVCPTGRISF 300 KLYDWNPAEF PRRLRHQIFQ WLASMPLELE GYIRPGCTIL TIFIAMPRYM WEKVAEDAGS 360 YIHRLVGAPD CLLHGRGTIT VYLNDMIFRV LKGGTSLKNV MVEMQAPRLH YVHPTCFEAG 420 KPVEFVVCGS NLLQPKFRFL ISFGGKYLPF TYCFAISNGK TASCHGNEVK KPCCDHQIYK 480 IRIPKTDVEV FGPAFIEVEN EFGLSNFIPI LFGDRQTCSG MKMVQKKLDE TLYSKRSQFG 540 VLDAVSGSCK VFGSRQKVMS ELILDIAWLL KEPNLEEDKL LSSSKVQRLN RLLSFLIGND 600 SIDLLEKILQ SLEDVMDAQK LFIPVNISDA DLNLFQKYIV QARESVHKRI QSGGEVVQCN 660 QSSLSEGYCF SQNRSENGRL YFTPRSIVDM EMAMEKNLGS VRNSVTIPLL NGDITRDNTH 720 FQPQTEKSCS RIFSKAVMSP RLLVLIVAVA ALCSGVCAVL FHPNTVGELA VSIRRSLFGY 780 SKS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 180 | 192 | RRKLERHNKRRRR |
2 | 188 | 193 | KRRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18830.1 | 0.0 | SBP family protein |