PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026438260.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 763aa MW: 87911.9 Da PI: 8.095

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026438260.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.7	6.1e-26	88	175	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn YA++vGF+vrk+ +k+k +++i+ rtf+Cs+eg+re++++ + r+r +trtgC a++++k +++++++v ++ +HnHela XP_026438260.1 88 EFYNVYARSVGFNVRKHWASKRKVDKKIIGRTFCCSCEGQREKHTRG--TPTRPRGVTRTGCMARMQIKINDNENYYVVEFLDDHNHELA 175 6****************************************9988..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 763 aa Download sequence
MGEQEKLYPF DLNESSYLDE VVRDGAQEKH YSVDSNEIGC PSEVMVTKNG YDVVVRTNPE 60 DITVIEEATG DDITMIGKIF KSEDDAYEFY NVYARSVGFN VRKHWASKRK VDKKIIGRTF 120 CCSCEGQREK HTRGTPTRPR GVTRTGCMAR MQIKINDNEN YYVVEFLDDH NHELASSDKV 180 HLLRSQRKIL PAQATLINNM ISSGFGATRI FSYMSEEAGG PQNLNFTQED CNNLVQGKRI 240 EWMKAGDAQL LLDYFQAKQK ENKSCFYTIQ PDEEDRIMNI FWCDAKSRLD YSAFGDVVCF 300 DTTFKTNGYD LPFAPIVGVN NHGQTILFGS ALLKDESTRS FVWLFETFLT VMEGKEMKTI 360 FTDQASQIAN AIKQVFPNAH HRLCLWHIFQ NDAKHLSHIF GIHESFLSDF RKCIYDYETE 420 YEFLSSWEQL LEKYELKDNK WLNKLFKLRE KWAQVYGREH FCAGMTTTQR SESINNYFKK 480 YFKKKQILRE FVGQFDKAVA ARREKAKKAD YKSMATKPNL TSVWEVEEKS SKIYTSKIFN 540 EFQMQVKRLI DLEFKLDSDD GTTSIYKVSS YIGKRAPRTV RITSSTLTFQ CSCKKFKFFG 600 ILCAHILKVL RHLKISDLPS EYYLKRWTKD ASNSIVIDSQ GNSLMVDCDP SLSARYSELS 660 HLALSIATTG CINEEASIFV KQALLRVLEE TKSLSTAQPN NVGVDREKNL LEISDEDEDL 720 PQRNTTLEDP IRKKTIGESS ARHKDPMEVG KRGKKGKMTK NKK

Sequence ? help Back to Top

Protein Sequence Length: 763 aa Download sequence

MGEQEKLYPF DLNESSYLDE VVRDGAQEKH YSVDSNEIGC PSEVMVTKNG YDVVVRTNPE  60
DITVIEEATG DDITMIGKIF KSEDDAYEFY NVYARSVGFN VRKHWASKRK VDKKIIGRTF  120
CCSCEGQREK HTRGTPTRPR GVTRTGCMAR MQIKINDNEN YYVVEFLDDH NHELASSDKV  180
HLLRSQRKIL PAQATLINNM ISSGFGATRI FSYMSEEAGG PQNLNFTQED CNNLVQGKRI  240
EWMKAGDAQL LLDYFQAKQK ENKSCFYTIQ PDEEDRIMNI FWCDAKSRLD YSAFGDVVCF  300
DTTFKTNGYD LPFAPIVGVN NHGQTILFGS ALLKDESTRS FVWLFETFLT VMEGKEMKTI  360
FTDQASQIAN AIKQVFPNAH HRLCLWHIFQ NDAKHLSHIF GIHESFLSDF RKCIYDYETE  420
YEFLSSWEQL LEKYELKDNK WLNKLFKLRE KWAQVYGREH FCAGMTTTQR SESINNYFKK  480
YFKKKQILRE FVGQFDKAVA ARREKAKKAD YKSMATKPNL TSVWEVEEKS SKIYTSKIFN  540
EFQMQVKRLI DLEFKLDSDD GTTSIYKVSS YIGKRAPRTV RITSSTLTFQ CSCKKFKFFG  600
ILCAHILKVL RHLKISDLPS EYYLKRWTKD ASNSIVIDSQ GNSLMVDCDP SLSARYSELS  660
HLALSIATTG CINEEASIFV KQALLRVLEE TKSLSTAQPN NVGVDREKNL LEISDEDEDL  720
PQRNTTLEDP IRKKTIGESS ARHKDPMEVG KRGKKGKMTK NKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-131	FAR1 family protein