PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026438239.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 202aa MW: 22465.9 Da PI: 9.7716 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.9 | 7.4e-05 | 27 | 49 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C + F ++ L H++ H XP_026438239.1 27 YSCNYCRRKFFSWQALGGHQNAH 49 99******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MGSSSSTDKN DEEAELEQAD QGLVRVYSCN YCRRKFFSWQ ALGGHQNAHK RERTLESRDR 60 LHRISAAAAS FRYAKMRNHQ HALSTSVASL PLHHVHAGCL SNNILLNVQA HSAFNKPTSS 120 LQSNSSRFNL YGQHHQERLS SSRLPVNDHQ PAILQLPTFV HGSAQQHNDG LLGRSFQLQG 180 TDAGLKGNNS SNQAYIDLAL KL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80730.1 | 7e-23 | C2H2 family protein |