PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026437915.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 286aa    MW: 32244.8 Da    PI: 8.9496
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026437915.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2218.7e-07132151120
                     EEETTTTEEESSHHHHHHHH CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                     ++C++C+ksF+r  nL+ H+
  XP_026437915.1 132 FSCHICKKSFNRYNNLQMHM 151
                     89*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MMESSSSSAS SNSIPLEAIT KSQSDAEPNF LTPLETSVNS DPLEPLPLLN CLLRKPLSTT  60
EQESEQKLGF QSIYNQNDEH DDVTLRIGLP NCSSSDVIST KLKGKREKEI VATDTQYWIP  120
TAAQILIGFT HFSCHICKKS FNRYNNLQMH MWGHGSQYRK GPDSLKGGQP RAMLNLPCYC  180
CTEGCKNNIN HPRAKPLKDF RTLQTHYKRK HGVKPFMCRK CGKFLAVKGD WRTHEKNCGK  240
LWLCICGSDF KHKRSLKDHV RAFGTMAHGP AFSTSSQGKE EVHLEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34790.11e-104C2H2 family protein