PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026437895.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family Trihelix
Protein Properties Length: 332aa    MW: 38079.6 Da    PI: 5.6549
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026437895.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix56.66.8e-1840122286
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf...erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     Wt+ e+  Lie++r+++ +l+rg+lk+ +Weev++ + +  gf   ++s++qC++k+e+l+kry+ +k++         s++ yfd ++
  XP_026437895.1  40 WTHLETVNLIEVYRNKWYSLKRGQLKASQWEEVANTIaSNCGFdepSKSSTQCRHKMEKLRKRYRSEKQRPVA------SNWIYFDLMD 122
                     **********************************99964556654489*******************999886......6999**9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MSQQPSEEKI PSSSETTKPP PSSSSTAIPT PPKKIPPIPW THLETVNLIE VYRNKWYSLK  60
RGQLKASQWE EVANTIASNC GFDEPSKSST QCRHKMEKLR KRYRSEKQRP VASNWIYFDL  120
MDQMERGIFP LTVKPISSIP PPAPGQNQST DDDEEDEVDD DNEDNDGFNN VIRSRSINHI  180
LRRPPIVSRV VDKRRSNSYS LPPQQQQQPQ VTQNWKSSRR PSERKRKSFE MEEEEVEEEE  240
EVEEENGIGG GGDGGLGGRG GELLMELASV IRKFGEGFVK TENMKMEMMR ELERNRLEME  300
AKRTEMIINS QNRIIDTINK AFASRKKAKE EA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.11e-26Trihelix family protein