PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026437630.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | NF-YC | ||||||||
Protein Properties | Length: 256aa MW: 29311.8 Da PI: 5.1443 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 177.6 | 1.2e-55 | 73 | 176 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q ie+++dfknh+lPlarikki+kadedv+misaeaPv+++kacelfileltlrsw+h+eenkrrtl+k+diaaa+trtdifdfl XP_026437630.1 73 QLQVFWSNQmqdIEHVNDFKNHTLPLARIKKIMKADEDVRMISAEAPVVFAKACELFILELTLRSWIHTEENKRRTLQKNDIAAAITRTDIFDFL 167 89******988889********************************************************************************* PP NF-YC 93 vdivprdel 101 vdivprd+l XP_026437630.1 168 VDIVPRDDL 176 *******87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MDKSGNQVPK QEQERQPTRE DASSPEFEQE TEMEASDSPR PEGPPSFSGP QHQLSYPPQV 60 QHFHQQQQQQ QQQLQVFWSN QMQDIEHVND FKNHTLPLAR IKKIMKADED VRMISAEAPV 120 VFAKACELFI LELTLRSWIH TEENKRRTLQ KNDIAAAITR TDIFDFLVDI VPRDDLKEDA 180 TLGFPRPAEP LPYYFIPRVP QHPSQVGHPV LTYDAGAAHQ PRPPLAAAFM PWAQPPPQQQ 240 QGQQQPPQPQ PQQTDA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 146 | 152 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56170.1 | 2e-67 | NF-YC family protein |