PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026437344.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 661aa MW: 75247.8 Da PI: 7.0087

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026437344.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.5	7.6e-07	96	176	24	90
FAR1 24 rngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 g+ t+ t+ C + g ++++kk t+++r+++ ++++gC +lk + d+kw+v+ eHnH l XP_026437344.1 96 VPGRKTRITLGCERGGVFRHHTKKnqallqfpsrtlapTVRSRKHTGTKKCGCPFTLKGVWQPDDKWKVKVECGEHNHVLE 176 456688999****97666666669********9***************99999*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 661 aa Download sequence
MEENSPMEVE TGGDIELFDP RKEYCATSLQ NWGEEEDVLV NPEHEERAKE VLKIDMADQF 60 VTDQVFNTRD EMIAWCQDVG RQNHMIVVIA KSEKPVPGRK TRITLGCERG GVFRHHTKKN 120 QALLQFPSRT LAPTVRSRKH TGTKKCGCPF TLKGVWQPDD KWKVKVECGE HNHVLESTVV 180 GHSFAGRLRD DEKQLLKDMI RSGLEPNEVL TTLKKTSKGA NKSTMRTIYN ARAHLRMTEM 240 EGRSEMQQVM KLLEEYHYVE WHVKDEETDE VQDIIWSHPD SIQLAKSFPS VLMINSTYRT 300 SRYHMPLSEI IGVSSTGKTF TVAFLFMKAE IKERYTWALS QLKAIYEPNA LPSVFVTSGV 360 DALVSAIKTV FPKADHILCT FQISRTIMVS CKHEFHNNEY SGSFLKDLEN LMQSETPVAF 420 DEGFASFESK WINYPTCVQY LRDNWLGLKE HFVSAWTNKV KHFGYTTTKT IESAHGKTSR 480 MLGSSQGTFV SCWTETHSSI TNEITTVKES LVDSLISVKP SHNLPILKDL KNNVSHLALD 540 MLVAERSRCQ SIDISGSSCE CSIRFTHGLP CAHEIKQFEH EGRSIALSDI DPHWRKLVAV 600 PAPIMPRNPD NLPEFYLFKQ KWEISSETER LTMLKKLKEI ITPSTTGLVF HSPSANDPVA 660 T

Sequence ? help Back to Top

Protein Sequence Length: 661 aa Download sequence

MEENSPMEVE TGGDIELFDP RKEYCATSLQ NWGEEEDVLV NPEHEERAKE VLKIDMADQF  60
VTDQVFNTRD EMIAWCQDVG RQNHMIVVIA KSEKPVPGRK TRITLGCERG GVFRHHTKKN  120
QALLQFPSRT LAPTVRSRKH TGTKKCGCPF TLKGVWQPDD KWKVKVECGE HNHVLESTVV  180
GHSFAGRLRD DEKQLLKDMI RSGLEPNEVL TTLKKTSKGA NKSTMRTIYN ARAHLRMTEM  240
EGRSEMQQVM KLLEEYHYVE WHVKDEETDE VQDIIWSHPD SIQLAKSFPS VLMINSTYRT  300
SRYHMPLSEI IGVSSTGKTF TVAFLFMKAE IKERYTWALS QLKAIYEPNA LPSVFVTSGV  360
DALVSAIKTV FPKADHILCT FQISRTIMVS CKHEFHNNEY SGSFLKDLEN LMQSETPVAF  420
DEGFASFESK WINYPTCVQY LRDNWLGLKE HFVSAWTNKV KHFGYTTTKT IESAHGKTSR  480
MLGSSQGTFV SCWTETHSSI TNEITTVKES LVDSLISVKP SHNLPILKDL KNNVSHLALD  540
MLVAERSRCQ SIDISGSSCE CSIRFTHGLP CAHEIKQFEH EGRSIALSDI DPHWRKLVAV  600
PAPIMPRNPD NLPEFYLFKQ KWEISSETER LTMLKKLKEI ITPSTTGLVF HSPSANDPVA  660
T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-17	FAR1 family protein