PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026437313.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | YABBY | ||||||||
Protein Properties | Length: 183aa MW: 20821.9 Da PI: 9.3496 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 75.4 | 1.8e-23 | 10 | 84 | 4 | 78 |
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee.lleelkve 78 + eq+Cy+ CnfCn ilavsvP +slf++vtvrCGhC++l svn+ q l+ ++ l++ ++ ++++ + XP_026437313.1 10 SFVNEQICYIPCNFCNIILAVSVPCSSLFETVTVRCGHCANLWSVNMGAVLQSLSLQD-LQRIDLPSsSKHNQDIQ 84 5789********************************************9999998887.55554444122222222 PP | |||||||
2 | YABBY | 112 | 1e-34 | 79 | 154 | 97 | 170 |
YABBY 97 sseklsenedeevprvpp..virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++ ++ + ++++ + v++PPek+ rvPsayn+fikeeiqrika+nPdi hr fs+aaknWahfP++h+gl XP_026437313.1 79 HNQDIQVMQVTTAAKTEKriVNQPPEKKHRVPSAYNQFIKEEIQRIKANNPDINHRKVFSTAAKNWAHFPHAHYGL 154 333333333333333333339*****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MMSSISSTMS FVNEQICYIP CNFCNIILAV SVPCSSLFET VTVRCGHCAN LWSVNMGAVL 60 QSLSLQDLQR IDLPSSSKHN QDIQVMQVTT AAKTEKRIVN QPPEKKHRVP SAYNQFIKEE 120 IQRIKANNPD INHRKVFSTA AKNWAHFPHA HYGLKLETKN NQAKLREEGS DLLMKRARLP 180 NEW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 1e-75 | YABBY family protein |