PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026436769.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 327aa MW: 38163.9 Da PI: 9.3335

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026436769.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	67.8	2.3e-21	227	312	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W k+ev+aLi +r em++++ ++++k + Wee+s m++ gf+r++ +Ck kw+ +n+ +k + + +k+++++ ++cpyf +++ XP_026436769.1 227 KWLKHEVQALISLRMEMQHKMLSRSAKFGMWEEISLGMASMGFTRTAMKCKGKWDTINRSFKTAAGIGQKGAENAATSCPYFLEMD 312 7***********************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MDSQVRVSSN SEAPLSGIVS RLHDTIQEPN ISPIKEKEAI CVKRTHSYSA DTEFGSDVAG 60 NENAHDELGE SLCWKKRKRE IHDELKCHFE ELVNRMMKKQ EDMYKVLLEK QDDMYKVLLW 120 KIEPKEKDRI TREQIWRNLD ERGRMRKETE QMKKDRITRE ETWWNVETET MRKEERRAQV 180 DTHLSLALRR QVVSTPKSTG KQIISIPQSP KIILQDQSGK KKQGLKKWLK HEVQALISLR 240 MEMQHKMLSR SAKFGMWEEI SLGMASMGFT RTAMKCKGKW DTINRSFKTA AGIGQKGAEN 300 AATSCPYFLE MDMFYKQCLV EAEIETS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-16	Trihelix family protein