PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026436760.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 455aa MW: 52584.1 Da PI: 5.4686

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026436760.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	73.6	3.4e-23	330	414	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+k+ev+aLi +r +e ++ g++k + Wee+s m + gf+r++k+C+ekwen+ +++++++ ++k+ e+ +t+pyf++l+ XP_026436760.1 330 KWPKHEVQALISLRMAVEPKYLIGASKFQMWEEISLGMVSMGFTRTAKKCREKWENIYGYFRRVAGSSKQP-GENAKTYPYFQELD 414 7****************************************************************9996.78888*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MSLTVDLSEE ISPFSVTWRN NKLLDTYQQK PCSSELKSQS DLESLQKLLP VRNNVTEFTE 60 CPTNYESFPP DLNSDEWFCL SEKQDDGGGG SGGADATGEN HRSGLDSQVR VSSNPKSPLP 120 EIVSRLHDTI QEPKASPMKN EEVAVKPTHS DTEFGSDVAG NENVDDELGE SLCIKKRKRE 180 IHDELKGHFE ELVNKMMNKQ EDMYKVFLEK QEDMYRVLLE KIEQKEKDRI TREQTWKNLE 240 MERMRKESEQ MEKDRIRREE TWRNLERELM RKEEEKRAHD THRSLALVSH LEQRVISTPG 300 STGQQIISIP HSSKIDLDDQ SGQKKQKITK WPKHEVQALI SLRMAVEPKY LIGASKFQMW 360 EEISLGMVSM GFTRTAKKCR EKWENIYGYF RRVAGSSKQP GENAKTYPYF QELDMFYQKC 420 LLQKAQEAAI EKAPEAEIGT SSNELSTSEH QSIFF

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MSLTVDLSEE ISPFSVTWRN NKLLDTYQQK PCSSELKSQS DLESLQKLLP VRNNVTEFTE  60
CPTNYESFPP DLNSDEWFCL SEKQDDGGGG SGGADATGEN HRSGLDSQVR VSSNPKSPLP  120
EIVSRLHDTI QEPKASPMKN EEVAVKPTHS DTEFGSDVAG NENVDDELGE SLCIKKRKRE  180
IHDELKGHFE ELVNKMMNKQ EDMYKVFLEK QEDMYRVLLE KIEQKEKDRI TREQTWKNLE  240
MERMRKESEQ MEKDRIRREE TWRNLERELM RKEEEKRAHD THRSLALVSH LEQRVISTPG  300
STGQQIISIP HSSKIDLDDQ SGQKKQKITK WPKHEVQALI SLRMAVEPKY LIGASKFQMW  360
EEISLGMVSM GFTRTAKKCR EKWENIYGYF RRVAGSSKQP GENAKTYPYF QELDMFYQKC  420
LLQKAQEAAI EKAPEAEIGT SSNELSTSEH QSIFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	3e-28	Trihelix family protein