PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026435502.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 399aa MW: 43009.5 Da PI: 6.975

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026435502.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.0004	242	264	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F+++ L H +H XP_026435502.1 242 YECSVCKKVFPTHQGLGGHRASH 264 99************999998887 PP
2	zf-C2H2	12.4	0.00048	297	319	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C ++F + L H+r+H XP_026435502.1 297 FGCHICLRRFASGKALGGHMRRH 319 56********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MDRRENIDNN QSHPLLTSSP DQEHAEPTNL ENEESMSRSQ DHAEEGVLVI SQGNGDVGFP 60 TRSPGPVEPN SSRPDVNVED GLGQSTTAIP EGDVAVGLPR CFVQGESSSA PTPGNVAEID 120 QASLVFHPGL SSKSGKKTRK NKKVQGIRIG MEGQPSNPLP DLNRFPFCYE CKKEFFSWKA 180 VHGHMRTHPE REWRGTVPPP NVARPSIPPW CAGIFCKQFT RARASGSRHV NENSASSSNA 240 RYECSVCKKV FPTHQGLGGH RASHKSVKGC HAVDNTAAEH QSAERNGSDA TGTGNIFGCH 300 ICLRRFASGK ALGGHMRRHP ERREEASSSV QDSNVDSTSL RRIGLVVDLN LPLPPNLPLP 360 PYLPLPTEND EDSSASSSSS SSSSSSPSPS PDASLDLHL

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MDRRENIDNN QSHPLLTSSP DQEHAEPTNL ENEESMSRSQ DHAEEGVLVI SQGNGDVGFP  60
TRSPGPVEPN SSRPDVNVED GLGQSTTAIP EGDVAVGLPR CFVQGESSSA PTPGNVAEID  120
QASLVFHPGL SSKSGKKTRK NKKVQGIRIG MEGQPSNPLP DLNRFPFCYE CKKEFFSWKA  180
VHGHMRTHPE REWRGTVPPP NVARPSIPPW CAGIFCKQFT RARASGSRHV NENSASSSNA  240
RYECSVCKKV FPTHQGLGGH RASHKSVKGC HAVDNTAAEH QSAERNGSDA TGTGNIFGCH  300
ICLRRFASGK ALGGHMRRHP ERREEASSSV QDSNVDSTSL RRIGLVVDLN LPLPPNLPLP  360
PYLPLPTEND EDSSASSSSS SSSSSSPSPS PDASLDLHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35280.1	2e-40	C2H2 family protein