PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026435323.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 608aa MW: 69061.3 Da PI: 7.5264

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026435323.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.9	1.4e-07	85	148	26	88
FAR1 26 geitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 g+ fvC ++g + ++ + ++++r++r++++++C k++ + ++kw++ l HnHe XP_026435323.1 85 GKGSFVLFVCDRSGVYRYTSCTpDTRKRQRRESKKCDCPFKVRDTCLPENKWRLRVLCGRHNHE 148 5556678******999998867788888888888888888888888*************8 PP
2	FAR1	24.7	7.9e-08	389	457	21	88
FAR1 21 kskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 ++k +g+ f C+++g + ++ + + ++r++r+++++gC k++ + ++kw++ l HnHe XP_026435323.1 389 ETKPEGKGSFVLFACNRSGVYRYTSCTpDARKRQRRETKKCGCPFKVRGTCLPENKWRLRVLCGRHNHE 457 334566677889******99999886788889999999999999999*************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MMEGDAPISK EGVEVIDLCQ NDQDEIPVSD PPKDGNMMEA DSSVSKKGMD VTQFFQTDQH 60 LNGAKRLLAR TKRVIIGKSE TKPAGKGSFV LFVCDRSGVY RYTSCTPDTR KRQRRESKKC 120 DCPFKVRDTC LPENKWRLRV LCGRHNHEAE NTSVPLFNRD EEQLGDKLIE SGVRPQQVLE 180 ALKEKNKECL ASTSGSAIYN TRSKLKLKEV ARKSVAQEDA GSVNHPHKDS NVMEENAPAS 240 NERINVARCF QTDAGPVSHL QKESILIEED TLISKVGIDV TQCFQTYQGE GPVKDPLNGS 300 NMMEEDVPTS KEGMEITQFY QTDQNKIPGS DPPEDGNMME DDAPISREGM DVTQFFQTDQ 360 LFDSRDAAFE WCQEVARENN TRIIIRKSET KPEGKGSFVL FACNRSGVYR YTSCTPDARK 420 RQRRETKKCG CPFKVRGTCL PENKWRLRVL CGRHNHEAEN IPLPLFNRDV DQLVVKLTAG 480 GARPRQVVEA LKQKNKDCLV SAKDIYNRRS SLKRHVAEKM SVMEQVMKLS TQYHYMVWYR 540 KDEETNELKD IVWAHPESTL LAKCFPSMLM IDCTYKTNRF KVPFFHVAGI SSLGTPFTVA 600 YAFIEEET

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MMEGDAPISK EGVEVIDLCQ NDQDEIPVSD PPKDGNMMEA DSSVSKKGMD VTQFFQTDQH  60
LNGAKRLLAR TKRVIIGKSE TKPAGKGSFV LFVCDRSGVY RYTSCTPDTR KRQRRESKKC  120
DCPFKVRDTC LPENKWRLRV LCGRHNHEAE NTSVPLFNRD EEQLGDKLIE SGVRPQQVLE  180
ALKEKNKECL ASTSGSAIYN TRSKLKLKEV ARKSVAQEDA GSVNHPHKDS NVMEENAPAS  240
NERINVARCF QTDAGPVSHL QKESILIEED TLISKVGIDV TQCFQTYQGE GPVKDPLNGS  300
NMMEEDVPTS KEGMEITQFY QTDQNKIPGS DPPEDGNMME DDAPISREGM DVTQFFQTDQ  360
LFDSRDAAFE WCQEVARENN TRIIIRKSET KPEGKGSFVL FACNRSGVYR YTSCTPDARK  420
RQRRETKKCG CPFKVRGTCL PENKWRLRVL CGRHNHEAEN IPLPLFNRDV DQLVVKLTAG  480
GARPRQVVEA LKQKNKDCLV SAKDIYNRRS SLKRHVAEKM SVMEQVMKLS TQYHYMVWYR  540
KDEETNELKD IVWAHPESTL LAKCFPSMLM IDCTYKTNRF KVPFFHVAGI SSLGTPFTVA  600
YAFIEEET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-11	FAR1 family protein