PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026434398.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 482aa MW: 55549.9 Da PI: 7.1191

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026434398.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.3	0.0011	240	262	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C +rk++L+rH+r++ XP_026434398.1 240 FFCEFCLNFMKRKEQLQRHMRKC 262 67*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MGSLEALTTT TSNGTNANCN GNQLQQQQQQ NHHGDGFDAP TEVDKEREIL ISSKNQNQIL 60 NPHPQPQQHQ QPLTPDNDGS LRRRRLGGAG GGGGSPLEVG SRVMCRWRDG KYHPVKVIER 120 RRLPCGGPND YEYYVHYTEF NRRLDEWVKV EQLDLNSVET DVDEKVEDKA TSLKMTRHQK 180 RKIDETHVEG HEELDAASLR EHEEFTKVKN IATIELGRYE IETWYFSPFP PEYNDTLKLF 240 FCEFCLNFMK RKEQLQRHMR KCDLKHPPGD EIYRSGTLSM FEVDGKKNKV YGQNLCYLAK 300 LFLDHKTLYY DVDLFLFYVL CECDERGCHM VGYFSKEKHS EESYNLACIL TLPPYQRKGY 360 GKFLIAFSYE LSKKEGKVGT PERPLSDLGL LSYRGYWTRV LLDILKKHKS NISIKELSDM 420 TAIKADDILT TLQGLDLIQY RKGQHAICAD PKVLDRHLKA AGQGGLDVDV SKLIWTPYKE 480 QG

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MGSLEALTTT TSNGTNANCN GNQLQQQQQQ NHHGDGFDAP TEVDKEREIL ISSKNQNQIL  60
NPHPQPQQHQ QPLTPDNDGS LRRRRLGGAG GGGGSPLEVG SRVMCRWRDG KYHPVKVIER  120
RRLPCGGPND YEYYVHYTEF NRRLDEWVKV EQLDLNSVET DVDEKVEDKA TSLKMTRHQK  180
RKIDETHVEG HEELDAASLR EHEEFTKVKN IATIELGRYE IETWYFSPFP PEYNDTLKLF  240
FCEFCLNFMK RKEQLQRHMR KCDLKHPPGD EIYRSGTLSM FEVDGKKNKV YGQNLCYLAK  300
LFLDHKTLYY DVDLFLFYVL CECDERGCHM VGYFSKEKHS EESYNLACIL TLPPYQRKGY  360
GKFLIAFSYE LSKKEGKVGT PERPLSDLGL LSYRGYWTRV LLDILKKHKS NISIKELSDM  420
TAIKADDILT TLQGLDLIQY RKGQHAICAD PKVLDRHLKA AGQGGLDVDV SKLIWTPYKE  480
QG