PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026434334.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 389aa MW: 44962.1 Da PI: 8.2151

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026434334.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.1	1.5e-18	79	165	2	88
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 fYn+YA GFsvrksks+ n++ +r fvC egkr+ +++++ + +++raetr +C a++k++ + + ++v+++ +H+H XP_026434334.1 79 FYNTYAFYFGFSVRKSKSHFF-SNKKLRDRLFVCHAEGKRDVDTRDAADVKSHRAETRFECLARMKISCVSnGDMYRVIEFIPNHTHV 165 ***************9998.6777****************99*****************998999**********5 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MQLQQGLHNG AQLEEDDLQV RRKLDLGKGI DLNISLDDIS TEESNENVAC VESIHSRIRK 60 EQIPVLGMEF ETEDKAYTFY NTYAFYFGFS VRKSKSHFFS NKKLRDRLFV CHAEGKRDVD 120 TRDAADVKSH RAETRFECLA RMKISCVSNG DMYRVIEFIP NHTHVTSSPS KTHLFRSHRK 180 MSAINIAQAE MTDRSGINPK ETVEFMSRQA GGREHLGFIP LDYKNYLRTK QTREMKTGDT 240 GGVLEYLQKK KLTDPNFFYA IQVDKEDLIT NIFWADARMM VDYDYFGDVV CFDTTFRKNK 300 EGRPFAMFVG VNHHKQSVIF GAALLYDETA ETFEWLFDIF AKTMSGKKPK SIFTDQDAAM 360 AKALASEWPE TTHRNLATVY MITRRKKNL

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MQLQQGLHNG AQLEEDDLQV RRKLDLGKGI DLNISLDDIS TEESNENVAC VESIHSRIRK  60
EQIPVLGMEF ETEDKAYTFY NTYAFYFGFS VRKSKSHFFS NKKLRDRLFV CHAEGKRDVD  120
TRDAADVKSH RAETRFECLA RMKISCVSNG DMYRVIEFIP NHTHVTSSPS KTHLFRSHRK  180
MSAINIAQAE MTDRSGINPK ETVEFMSRQA GGREHLGFIP LDYKNYLRTK QTREMKTGDT  240
GGVLEYLQKK KLTDPNFFYA IQVDKEDLIT NIFWADARMM VDYDYFGDVV CFDTTFRKNK  300
EGRPFAMFVG VNHHKQSVIF GAALLYDETA ETFEWLFDIF AKTMSGKKPK SIFTDQDAAM  360
AKALASEWPE TTHRNLATVY MITRRKKNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-57	FAR1 family protein