PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026433859.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 258aa    MW: 28385.9 Da    PI: 9.4236
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026433859.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.000477294123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ Cgk Fs+   L  H  +H
  XP_026433859.1 72 FECKTCGKGFSSFQALGGHRASH 94
                    89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MVSIRNQKRF TTTGAAAARE SASMNNDSSM KMNSTEHPST ASMKMNSTEQ PSTESRVYDD  60
STEKQSMASR VFECKTCGKG FSSFQALGGH RASHKKLRLV KGDGSKMDGR LSSSSKSSSA  120
LHECSICGKG YAIGQALGGH MRRHRNNPSK ESPSRSLSVS PPSSPPPEEQ QLFSLPLLPH  180
SSSPLAEEPR LSLPLLPQTP EPKTLKRKYH AVHNDKRLCL DLNLGPPCSY YEEEIDSDDR  240
HHHQSMPTKP YLGLTLFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46090.11e-23C2H2 family protein