PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026433568.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 397aa    MW: 44733.5 Da    PI: 5.8241
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026433568.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR171.22.3e-22134219190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fYneYA++ GFsvrk + k+s  +g+i kr   Cskeg++e++k+   + +++r+  rtgC a+++   +  g  +vtk++ eHnHela
  XP_026433568.1 134 EFYNEYARRKGFSVRKGHVKRS-SDGQIRKRVVLCSKEGFKERHKRG--TPQKERPILRTGCMARIQCIAQ-GGSLVVTKFDDEHNHELA 219
                     6*****************9999.8888****************9988..89999*************9999.9***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MGLRMIAGAS AETTVGDAMV MKLQNLGIDV FKHGGVQMVD GPVVMLQNVL RMVDPIESDG  60
ETALWDLNFM PTDDFDQDDF HYNDNGLLES ESSMDSSDEV DENSVPDGDY TIRDPSDDVP  120
KLGMTFESDD KLFEFYNEYA RRKGFSVRKG HVKRSSDGQI RKRVVLCSKE GFKERHKRGT  180
PQKERPILRT GCMARIQCIA QGGSLVVTKF DDEHNHELAD VSEAHLLLPQ QATYMESLHS  240
GGCGPTQTFA IMSADHHGSD QLNFTQIDCK NYFQKRRREI YKKGDAQVAV NYFRHMQKEN  300
PAFFYAVQVD KNDQACNFFW ADAKCAPFVG VNHHGMSVLF GMALLLDETI ESFVWVFDSF  360
LSAISGKHPK TIFTYQAQAI GNAIKQAMPT THHRLCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-54FAR1 family protein