PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026433232.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 437aa MW: 46538 Da PI: 9.4191

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026433232.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.2e-05	56	78	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_026433232.1 56 FVCEICNKGFQRDQNLQLHRRGH 78 89*******************88 PP
2	zf-C2H2	15.1	6.6e-05	132	154	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H++t+ XP_026433232.1 132 WKCDKCSKKYAVQSDWKAHLKTC 154 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MTVSTSGEAS VSSSGAPPPV QPSLTAKKKR NLPGMPDPNA EVIALSPKTL MATNRFVCEI 60 CNKGFQRDQN LQLHRRGHNL PWKLRQRANK EIRKRVYVCP ETSCVHHDPS RALGDLTGIK 120 KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH LKTCGTKEYK CDCGTLFSRR DSFITHRAFC 180 DALAEESAKA QTTTTTNSKS SEEQNNQIQN EKQVVVGSCC SSPPSTSAIS AIQTTALPGN 240 LQPPQTTSFS DLICGMGGGR SERSSTSATE QPTSLSLSSK NGSSMFASTM TSNQESHQFS 300 SPQPAMSATA LLQKAAQMGA AATSASLLRG LGFSVSGSSS SQQQQQTENL QWDTSRSNNL 360 HQHQIDNHGG AGLSDGLGVP SSLFGSKPAT LDFLGLGMGR GGGGSSFSSL MNSVDANLNI 420 ANAVGPFGDV NSGNTAK

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MTVSTSGEAS VSSSGAPPPV QPSLTAKKKR NLPGMPDPNA EVIALSPKTL MATNRFVCEI  60
CNKGFQRDQN LQLHRRGHNL PWKLRQRANK EIRKRVYVCP ETSCVHHDPS RALGDLTGIK  120
KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH LKTCGTKEYK CDCGTLFSRR DSFITHRAFC  180
DALAEESAKA QTTTTTNSKS SEEQNNQIQN EKQVVVGSCC SSPPSTSAIS AIQTTALPGN  240
LQPPQTTSFS DLICGMGGGR SERSSTSATE QPTSLSLSSK NGSSMFASTM TSNQESHQFS  300
SPQPAMSATA LLQKAAQMGA AATSASLLRG LGFSVSGSSS SQQQQQTENL QWDTSRSNNL  360
HQHQIDNHGG AGLSDGLGVP SSLFGSKPAT LDFLGLGMGR GGGGSSFSSL MNSVDANLNI  420
ANAVGPFGDV NSGNTAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-102	C2H2 family protein