PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026433223.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 142aa MW: 16290.8 Da PI: 10.733

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026433223.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	88.3	4.2e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev +iifsstgkly+++s XP_026433223.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGLIIFSSTGKLYDFAS 59 8***********************************************86 PP
2	K-box	68.6	2.1e-23	80	141	8	69
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 + +++ + +q+e+a L+++++nLq+++R+l+Ge+L+ Ls+k+Lq+Le+qLe sl+ +R kK XP_026433223.1 80 MNPTSEVKFWQREAAGLRQQLQNLQENHRQLMGEELSGLSVKDLQNLENQLEMSLRGVRVKK 141 3678899****************************************************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGLIIFSS TGKLYDFAST 60 SMKTVIERHN KSKEEHHQVM NPTSEVKFWQ REAAGLRQQL QNLQENHRQL MGEELSGLSV 120 KDLQNLENQL EMSLRGVRVK KV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	5e-81	MIKC_MADS family protein