PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026433163.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 232aa MW: 26036.7 Da PI: 9.4013 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 57.7 | 3.3e-18 | 3 | 97 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 +C+ C + r++C++dC + +yfpa ++ +f +v+ +FG + l++++++pe+ + a +sl+ +A+ar+ d v+G g+ +l++++++l+ael ++ XP_026433163.1 3 PCEKCGHNRKRCPADCSYVQYFPAGRRDDFVAVNVVFGSIKFLSVVNEAPEQ--NLASESLIRHARARIADRVNGFSGTAYQLRNRVNELRAELTER 97 7**********************************************97765..6799***********************************9875 PP | |||||||
2 | DUF260 | 63.8 | 4.2e-20 | 126 | 223 | 1 | 98 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +C aC+++r++C+++C l+ +f ++++++++nv l+G+ + + +++++ er+ a++ ++ e++a+ + P +G +i++l+q++++l l+ XP_026433163.1 126 PCGACRHQRKRCPANCSLRAIFTSQRNADLNNVLALYGVPKFKSNMDRVDAAERRLAAERMIQESRAWNEFPGRGFEVLINTLNQEVQRLTRTLE 220 7*****************************************************************************************99998 PP DUF260 96 llk 98 l+k XP_026433163.1 221 LAK 223 876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 232 aa Download sequence |
MAPCEKCGHN RKRCPADCSY VQYFPAGRRD DFVAVNVVFG SIKFLSVVNE APEQNLASES 60 LIRHARARIA DRVNGFSGTA YQLRNRVNEL RAELTERGIP IGGEIIPQIE AEQLEAEQSV 120 VHNGGPCGAC RHQRKRCPAN CSLRAIFTSQ RNADLNNVLA LYGVPKFKSN MDRVDAAERR 180 LAAERMIQES RAWNEFPGRG FEVLINTLNQ EVQRLTRTLE LAKLPFKKRL GG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G50510.1 | 3e-14 | LBD family protein |