PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026433154.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 271aa    MW: 30747.2 Da    PI: 9.3599
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026433154.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26057.34.7e-1842136197
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +C+ C + r++C++dC + +yfpa ++ +f +v+ +FG  + l++++++pe+  + a +sl+ +A+ar+ d v+G  g+  +l++++++l+ael 
  XP_026433154.1  42 PCEKCGHNRKRCPADCSYVQYFPAGRRDDFVAVNVVFGSIKFLSVVNEAPEQ--NLASESLIRHARARIADRVNGFSGTAYQLRNRVNELRAELT 134
                     7**********************************************97765..6799***********************************98 PP

          DUF260  96 ll 97 
                     ++
  XP_026433154.1 135 ER 136
                     75 PP
2DUF26063.36e-20165262198
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +C aC+++r++C+++C l+ +f ++++++++nv  l+G+ +  + +++++  er+ a++ ++ e++a+ + P +G   +i++l+q++++l   l+
  XP_026433154.1 165 PCGACRHQRKRCPANCSLRAIFTSQRNADLNNVLALYGVPKFKSNMDRVDAAERRLAAERMIQESRAWNEFPGRGFEVLINTLNQEVQRLTRTLE 259
                     7*****************************************************************************************99998 PP

          DUF260  96 llk 98 
                     l+k
  XP_026433154.1 260 LAK 262
                     776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MMIEILENIT EWRDTKVLFI KNSSKGHSWF VKESIFKLEM APCEKCGHNR KRCPADCSYV  60
QYFPAGRRDD FVAVNVVFGS IKFLSVVNEA PEQNLASESL IRHARARIAD RVNGFSGTAY  120
QLRNRVNELR AELTERGIPI GGEIIPQIEA EQLEAEQSVV HNGGPCGACR HQRKRCPANC  180
SLRAIFTSQR NADLNNVLAL YGVPKFKSNM DRVDAAERRL AAERMIQESR AWNEFPGRGF  240
EVLINTLNQE VQRLTRTLEL AKLPFKKRLG G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50510.16e-14LBD family protein