PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026432660.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 337aa MW: 37352.6 Da PI: 10.0615

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026432660.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	51.2	3.4e-16	31	114	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ v +L++a++ ++ +r+klk+++We+v++++ +++ ++++qCk+k+e+++kry+ + ++ s++p+f++l+ XP_026432660.1 31 EWSEGAVSCLLDAYETKWVLRNRAKLKGHDWEDVARHVssraNSTKAPKTQTQCKNKIESMKKRYRSESSSNDP------SSWPLFQRLD 114 5***********************************98888888999**************9999996......57***997 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MEKEEANSNK PIVATSSGLG GGGGDRLKRD EWSEGAVSCL LDAYETKWVL RNRAKLKGHD 60 WEDVARHVSS RANSTKAPKT QTQCKNKIES MKKRYRSESS SNDPSSWPLF QRLDLLLRFR 120 TATTPPATDN CPASSTATAT ATILNAPLLL LDPPPAAAQP PLPPLVIPLH SLPHPNMGGG 180 CLDSHEPNDA VREASKEEDL IRAKKIVENG SAKTSMETGS TSGSTPVSET IKEKLKMKEI 240 KLEKNKKKRN NKRRRGRGED WEVAESIRWL AEVVMRSEQA RMETMKEVEK MRMEAEAKKG 300 EMDLKRTEIM ANTQLQIAKI LASNGKDIDS SLRIGRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	2e-41	Trihelix family protein