PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026432440.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WOX

Protein Properties

Length: 446aa MW: 49707.5 Da PI: 6.8922

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026432440.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.1	1.7e-19	69	129	3	57
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 R+t+t++q+++L++l+++ r p+ae+++++++kl +++ ++V++WFqN++a+e++ XP_026432440.1 69 ARWTPTSDQIRILKDLYYNngVRSPTAEQIQRISAKLrqygKIEGKNVFYWFQNHKARERQ 129 7***************8678***********************************97 PP
2	Wus_type_Homeobox	112.4	2.4e-36	67	131	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RWtPt++Qi+iL++ly+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+ XP_026432440.1 67 TTARWTPTSDQIRILKDLYYnNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQKK 131 679*************9779***************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MEHLHHLQDP QHQMQNFHQL QLQQQQPQQQ VQYINIEDSG SGSSSSSNCK NSSSLLCRQN 60 NTCSTTTTAR WTPTSDQIRI LKDLYYNNGV RSPTAEQIQR ISAKLRQYGK IEGKNVFYWF 120 QNHKARERQK KRFTLDMAAM QQQRSSTSSG LSNGAGTGTT GVGLNYGGGT RGGGGWRHTD 180 LHHLHDYYYA IENNHPTSNI HNPGIPSPTS PPSSHGMLTS VGPIGTSTAS YGSVLMERRF 240 RECSISAGGS SSIGNSTSNN IGGWVGVHQN HNTNNYHHQE IPTPQYPSYT TTSSTLSTYS 300 PAFVEKPSRI LPIQLFKEEP DNNNEEEEEV APEIETLPLF PMQTGDEDLE IPVVENQTII 360 PNYFIRSSNS ETSNGFMNHN PLTGYYIRSS SSVVVPLHDH HHHHQQELMN GGINLNRTAS 420 SSLELTLNSY TPITPEAVHG HHHQLN

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MEHLHHLQDP QHQMQNFHQL QLQQQQPQQQ VQYINIEDSG SGSSSSSNCK NSSSLLCRQN  60
NTCSTTTTAR WTPTSDQIRI LKDLYYNNGV RSPTAEQIQR ISAKLRQYGK IEGKNVFYWF  120
QNHKARERQK KRFTLDMAAM QQQRSSTSSG LSNGAGTGTT GVGLNYGGGT RGGGGWRHTD  180
LHHLHDYYYA IENNHPTSNI HNPGIPSPTS PPSSHGMLTS VGPIGTSTAS YGSVLMERRF  240
RECSISAGGS SSIGNSTSNN IGGWVGVHQN HNTNNYHHQE IPTPQYPSYT TTSSTLSTYS  300
PAFVEKPSRI LPIQLFKEEP DNNNEEEEEV APEIETLPLF PMQTGDEDLE IPVVENQTII  360
PNYFIRSSNS ETSNGFMNHN PLTGYYIRSS SSVVVPLHDH HHHHQQELMN GGINLNRTAS  420
SSLELTLNSY TPITPEAVHG HHHQLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	3e-29	WOX family protein