PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026432358.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 234aa MW: 25764.3 Da PI: 10.0469 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.9 | 0.0014 | 156 | 178 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cgk+F + L H+++H XP_026432358.1 156 HPCKICGKVFLSGCALGGHQKSH 178 78********9999999999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MGGTAKRGRK SSSTSTTSVE KSSIDKQKEP VFGEKELVET LMHIWDLSNS YSIVSANSEK 60 DRSTKFSVTK KRKLQDTVYT EDGLKKPRTD KETVEDYRGE ILLGSVSGTF SYGFCGKPFN 120 NYQALGGHKS SCKSKSLKSQ VVKPAVQDSN ATSKIHPCKI CGKVFLSGCA LGGHQKSHKT 180 EKVEPSRSSV SPPPKEIKES NLHLIQSSTT SVQEEQANVL NKKIMMFDLK EKPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60580.1 | 7e-10 | C2H2 family protein |