PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026432049.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 694aa MW: 75706.9 Da PI: 6.2465

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026432049.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.3	3.5e-28	210	263	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_026432049.1 210 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVDRLTRENVASHLQKYRL 263 79*****************.******************************8 PP
2	Myb_DNA-binding	37.9	4e-12	212	262	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ ++t++++ s++qky+ XP_026432049.1 212 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvDRLTRENVASHLQKYR 262 678***********************************************7 PP
3	Response_reg	76.7	8.7e-26	29	137	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+ + +++l+++l++ +y +v++++++ al++l+e++ +Dl++ D++mp+mdG++ll+ e++lp+i+++a+g+ + + + G XP_026432049.1 29 VLAVDDDLICLRVLESLLRRCQY-HVTTTTQAVTALKMLRENRdkFDLVISDVQMPDMDGFKLLELVGL-EMDLPVIMLSANGDTRNVMRGITHG 121 799******************.***********999889***************87754.558****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +eel + XP_026432049.1 122 ACDYLLKPVRIEELKN 137 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 694 aa Download sequence
MTVEESLIRG SSGSEDEQKI DLFPIGMRVL AVDDDLICLR VLESLLRRCQ YHVTTTTQAV 60 TALKMLRENR DKFDLVISDV QMPDMDGFKL LELVGLEMDL PVIMLSANGD TRNVMRGITH 120 GACDYLLKPV RIEELKNIWQ HVLRKKKVEP KDQNNLDKLN PGMGDSGKGH SVSGNDDQNK 180 LNRKRKDQNE EDDDECEDEN DNDDPSSQKK PRVVWSVELH RKFVAAVNQL GIDKAVPKKI 240 LDLMNVDRLT RENVASHLQK YRLYLKRISC VASQQANMVA ALGGKDASYL RMGSLDGFGD 300 FHGFGGPGQL PNGSLASYSP VGMLGRLNTP VGIGLHGPSS GMMQLGRPQN PTNSVHDLGK 360 LRQSVIPGNQ NGNFLQGMPT PLELDQLQQS KSIARIGEFS SSIDPRAFPG PSSFPDTGVT 420 IANSNNSFQN VHSNSLLLLG GPQQTQSRAG FGNQSSVRMP SVNSESFEFG FGVSSHLPDL 480 GRCNDNWPTA APISGFPSNP LPLGDNPFSH ADLSSDILTD NISSINATIG NNSLDVSSNS 540 VTNQLDSRRD LQPGPIGVAQ HDKFSNFVNL GDNVGQSMNL VPKQKWISHK QDYNQTSNLL 600 FSSSSPSVPI HGVVDPLGQN STMSNRKTDL ISTSQPAAGS NSYFTRRNGI EKSSIGMTEN 660 FLLDQNRSQG GAVMSNSCGS LEDLMSAMIK RDFG

Sequence ? help Back to Top

Protein Sequence Length: 694 aa Download sequence

MTVEESLIRG SSGSEDEQKI DLFPIGMRVL AVDDDLICLR VLESLLRRCQ YHVTTTTQAV  60
TALKMLRENR DKFDLVISDV QMPDMDGFKL LELVGLEMDL PVIMLSANGD TRNVMRGITH  120
GACDYLLKPV RIEELKNIWQ HVLRKKKVEP KDQNNLDKLN PGMGDSGKGH SVSGNDDQNK  180
LNRKRKDQNE EDDDECEDEN DNDDPSSQKK PRVVWSVELH RKFVAAVNQL GIDKAVPKKI  240
LDLMNVDRLT RENVASHLQK YRLYLKRISC VASQQANMVA ALGGKDASYL RMGSLDGFGD  300
FHGFGGPGQL PNGSLASYSP VGMLGRLNTP VGIGLHGPSS GMMQLGRPQN PTNSVHDLGK  360
LRQSVIPGNQ NGNFLQGMPT PLELDQLQQS KSIARIGEFS SSIDPRAFPG PSSFPDTGVT  420
IANSNNSFQN VHSNSLLLLG GPQQTQSRAG FGNQSSVRMP SVNSESFEFG FGVSSHLPDL  480
GRCNDNWPTA APISGFPSNP LPLGDNPFSH ADLSSDILTD NISSINATIG NNSLDVSSNS  540
VTNQLDSRRD LQPGPIGVAQ HDKFSNFVNL GDNVGQSMNL VPKQKWISHK QDYNQTSNLL  600
FSSSSPSVPI HGVVDPLGQN STMSNRKTDL ISTSQPAAGS NSYFTRRNGI EKSSIGMTEN  660
FLLDQNRSQG GAVMSNSCGS LEDLMSAMIK RDFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-131	ARR-B family protein