PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026431886.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 655aa MW: 75725 Da PI: 7.679

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026431886.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.6	1.8e-17	49	132	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY+eYAk++GF v +++ k++ ++g + f C + gk++++ + +r + +tgC a ++ ++++ dgkw+++ ++leHnH+++ XP_026431886.1 49 NFYKEYAKKIGFPVHRRARKRN-DDGDLRCVSFGCARGGKHRRKVVN------PRGSMETGCGAYITCRRRQgDGKWVMSVVSLEHNHKCN 132 6*************998887.8888*********9998777......99*******************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MVEIHDKSPS TDKETLLVNY IVTGSNGTDH DVDIPSKGRV FDDDDEIYNF YKEYAKKIGF 60 PVHRRARKRN DDGDLRCVSF GCARGGKHRR KVVNPRGSME TGCGAYITCR RRQGDGKWVM 120 SVVSLEHNHK CNPEDVKLYK CFEPVCSNAQ KQRRIDLNGG ASTVKKKAKT AVQNEGLGCA 180 EMGAERNATG DGRRLRIGKG DVEALLKFFA KMNGENAGFY WQAEFDEENY LKNVFWADGM 240 SRAAYKDFGD VVSFDTKYLV DKYDSPLVAF VGVNHHGQTI LLGCGLVSSE DTEAFVWLFT 300 EWLMCMSGKA PKAIITDQAK AIQNAIEIVF PQTRHRWCLW SVMKKLPDEF GKHDKCLDIA 360 SDMKAAVYDT QSSDEFEQLW HWMLVEYGLQ DNQWLKYLFE ERSRWVPCYL KETFWAGMST 420 TQRNEGSNMF FDGYINPSSS IKQFAEQYEV VLRKKVEKEK LADDTSSQKT IPLVTTYPME 480 KQIQKRYTNS KFKEFQVELL AMLYCSFTKI ERTPTHTIYN IQEDVYNEDF RKNMTFHATY 540 NAEECDVHCT CQKFSFDGIQ CRHALSVLCH NSVRKLPDKY ILRWWRKDVI RDHTKVKVGF 600 SCWTNDDATK RYHDLCTKFA ELAALAANDE TLYRDIVNWL DCKKKELQQT VIKES

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MVEIHDKSPS TDKETLLVNY IVTGSNGTDH DVDIPSKGRV FDDDDEIYNF YKEYAKKIGF  60
PVHRRARKRN DDGDLRCVSF GCARGGKHRR KVVNPRGSME TGCGAYITCR RRQGDGKWVM  120
SVVSLEHNHK CNPEDVKLYK CFEPVCSNAQ KQRRIDLNGG ASTVKKKAKT AVQNEGLGCA  180
EMGAERNATG DGRRLRIGKG DVEALLKFFA KMNGENAGFY WQAEFDEENY LKNVFWADGM  240
SRAAYKDFGD VVSFDTKYLV DKYDSPLVAF VGVNHHGQTI LLGCGLVSSE DTEAFVWLFT  300
EWLMCMSGKA PKAIITDQAK AIQNAIEIVF PQTRHRWCLW SVMKKLPDEF GKHDKCLDIA  360
SDMKAAVYDT QSSDEFEQLW HWMLVEYGLQ DNQWLKYLFE ERSRWVPCYL KETFWAGMST  420
TQRNEGSNMF FDGYINPSSS IKQFAEQYEV VLRKKVEKEK LADDTSSQKT IPLVTTYPME  480
KQIQKRYTNS KFKEFQVELL AMLYCSFTKI ERTPTHTIYN IQEDVYNEDF RKNMTFHATY  540
NAEECDVHCT CQKFSFDGIQ CRHALSVLCH NSVRKLPDKY ILRWWRKDVI RDHTKVKVGF  600
SCWTNDDATK RYHDLCTKFA ELAALAANDE TLYRDIVNWL DCKKKELQQT VIKES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-111	FAR1 family protein