PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026431439.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MIKC_MADS
Protein Properties Length: 220aa    MW: 25503.8 Da    PI: 9.8858
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026431439.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.81.6e-291059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ri+n++ rqvtfskRrng+lKKA+ELS+LCda+v +iifsstgklye+ss
  XP_026431439.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELSILCDAQVGLIIFSSTGKLYEFSS 59
                    8***********************************************96 PP
2K-box77.73e-26821739100
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     +++++a+ +++e+a L+ e+++Lq+++R+l+G++L+sLs+keLq+Le+qLe sl  +R +K++   ++i+el +k + l++en++L kk++e
  XP_026431439.1  82 NANSEAKFWKREAAALRHELQSLQENHRQLMGQELSSLSVKELQNLENQLEMSLHGVRMQKDQKRNDEIHELNRKLNLLHQENMDLLKKINE 173
                     788999***********************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELSILCD AQVGLIIFSS TGKLYEFSST  60
NMKSTMERYN KSKEEQHHPL PNANSEAKFW KREAAALRHE LQSLQENHRQ LMGQELSSLS  120
VKELQNLENQ LEMSLHGVRM QKDQKRNDEI HELNRKLNLL HQENMDLLKK INEARNRNET  180
NRISHSPNGF NLEEEECIKL QLSQPQQQNY AATENPAALS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.12e-86MIKC_MADS family protein