PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026431363.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WOX

Protein Properties

Length: 368aa MW: 41239.9 Da PI: 5.2378

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026431363.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	37.9	3e-12	99	157	4	57
-SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +++++eq+++Le l+ r p+a ++ +++++l +++ +V+ WFq +R +e++ XP_026431363.1 99 QWSPSPEQTRILEMLYSGgLRSPTAIQINKITDQLikygNIKVMDVYLWFQEHRNQERQ 157 79*************99**********************************9996 PP
2	Wus_type_Homeobox	71	2e-23	98	159	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 t W+P+peQ +iLe+ly+ Glr+P++ +i++it +L +yG+i+ V+ WFQ ++ erq q XP_026431363.1 98 TQWSPSPEQTRILEMLYSGGLRSPTAIQINKITDQLIKYGNIKVMDVYLWFQEHRNQERQEQ 159 68*********************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MEFPELGPPN VPSGDADDRD ESHDGYTTEE DPIDEKPEPS RHEVVIDAKE MLEKEKKTHL 60 PWSTNWIQEM LDSANDPSAH FPLLVSDSGG GSFHFDGTQW SPSPEQTRIL EMLYSGGLRS 120 PTAIQINKIT DQLIKYGNIK VMDVYLWFQE HRNQERQEQT SSSLSPKGIE GLTHITETPT 180 SSSISKRGKG KAVSTQEKSG KRKVVSDMIK LNLSVDTGVV IPKKIDPTPP RVSKRTVSVE 240 EKSGRGKVVS MPSEMSGPVS QEQEGSGNSR YDSTGKPLPI NFEKQREQIP TVEECIDVRA 300 NIIFLDRDNL EESNTQNLSP QETSLPTTIS SSASSTQGEE SRPEGQNNTG IDRKKRRWFK 360 LFSWWQKK

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MEFPELGPPN VPSGDADDRD ESHDGYTTEE DPIDEKPEPS RHEVVIDAKE MLEKEKKTHL  60
PWSTNWIQEM LDSANDPSAH FPLLVSDSGG GSFHFDGTQW SPSPEQTRIL EMLYSGGLRS  120
PTAIQINKIT DQLIKYGNIK VMDVYLWFQE HRNQERQEQT SSSLSPKGIE GLTHITETPT  180
SSSISKRGKG KAVSTQEKSG KRKVVSDMIK LNLSVDTGVV IPKKIDPTPP RVSKRTVSVE  240
EKSGRGKVVS MPSEMSGPVS QEQEGSGNSR YDSTGKPLPI NFEKQREQIP TVEECIDVRA  300
NIIFLDRDNL EESNTQNLSP QETSLPTTIS SSASSTQGEE SRPEGQNNTG IDRKKRRWFK  360
LFSWWQKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	2e-18	WOX family protein