PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026431230.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | LBD | ||||||||
Protein Properties | Length: 282aa MW: 31949.2 Da PI: 5.5665 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 123 | 1.5e-38 | 7 | 105 | 1 | 98 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC+++Cv+apyf++eq + +fa++hk+FGasnv+kll++lp +r +a+ ++ yeA+ar++dPvyG+v++i++lqqq+ +l+++l XP_026431230.1 7 PCGACKFLRRKCVRGCVFAPYFCHEQgATHFAAIHKVFGASNVSKLLSHLPLGDRCEAAVTISYEAQARIQDPVYGCVSHIFALQQQVVSLQEQL 101 7*************************89******************************************************************9 PP DUF260 95 allk 98 +l+ XP_026431230.1 102 TTLR 105 9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 282 aa Download sequence |
MTGFGSPCGA CKFLRRKCVR GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLLSHLPLGD 60 RCEAAVTISY EAQARIQDPV YGCVSHIFAL QQQVVSLQEQ LTTLRVQQAA QGFINGGNIT 120 ASTNDHIHPH ENHNKSFYGD FPTTYPQDIE ALYMQLNESK ILSEQLYQNK TSMNDSNSTY 180 TTDDENMFYY ENGVVNMENS PSNQMSQEHH DHESFAPPEE TVHQFMASAS FDEQYSSDEH 240 HQHAAMASQY LDDMQMNARK WTFQDTNHAD LQSMAFAYYQ HS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58190.1 | 2e-56 | LBD family protein |