PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026431227.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 282aa    MW: 31962.4 Da    PI: 4.8482
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026431227.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260121.16e-387106199
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC ++Cv+ap+f++eq + +fa++hk+FGasnv+kll++lp  +r +a+ ++ yeA+ar++dPvyG+v++i++lqqq+++l+++l
  XP_026431227.1   7 PCGACKFLRRKCLRGCVFAPHFCHEQgATHFAAIHKVFGASNVSKLLTHLPLGDRCEAAVTISYEAQARIQDPVYGCVAHIFALQQQVMSLQEQL 101
                     7*************************89******************************************************************* PP

          DUF260  95 allke 99 
                      +l++
  XP_026431227.1 102 TTLRA 106
                     99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MTGFGSPCGA CKFLRRKCLR GCVFAPHFCH EQGATHFAAI HKVFGASNVS KLLTHLPLGD  60
RCEAAVTISY EAQARIQDPV YGCVAHIFAL QQQVMSLQEQ LTTLRAEQAA QVFVNGGNNT  120
TTTSDHIHQQ DIHNKLFYGD FPTTYPQDIE ALNIQLNESK ILSEQLYQNN ISMNDSNSTA  180
TTDDENMFYY ENGVVNMENS PSNQMSQEYH DHESYTPPEE TVHQFMTSAS FDEQYSSDEH  240
HQHAAMDSLY LDDMQMNARK WIFQDTNQVD LQSMALAYLQ HL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.19e-62LBD family protein