PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026431226.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 282aa    MW: 31718 Da    PI: 5.7441
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026431226.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260122.71.9e-3871071100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkCa++Cv+apyf++eq + +fa++hk+FGasnv+kll++lp  +r +a+ ++ yeA+ar++dPvyG+v++i++lqqq+++l++++
  XP_026431226.1   7 PCGACKFLRRKCARGCVFAPYFCHEQgAIHFAAIHKVFGASNVSKLLSHLPLGDRCEAAVTISYEAQARIQDPVYGCVSHIFALQQQVMSLQEQI 101
                     7*************************889*****************************************************************9 PP

          DUF260  95 allkee 100
                      +l+++
  XP_026431226.1 102 TTLRTQ 107
                     998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MTGFGSPCGA CKFLRRKCAR GCVFAPYFCH EQGAIHFAAI HKVFGASNVS KLLSHLPLGD  60
RCEAAVTISY EAQARIQDPV YGCVSHIFAL QQQVMSLQEQ ITTLRTQQAS QGFVNGGNST  120
TSTNDHVHLH DKHNKSFYGD FPTTYPQDIE ALYMQLNESK VLSEQLYQNN TSMDDSNSTS  180
TVTADAENMF YHENGVVNME NSPSNQMSQE YHDHESFTSP EGIVHQFMTS ASFDEQYSSD  240
EHHQHAAMAY LDGMQMNARK WTFQDTNQVD LQSMAFAYFQ HS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.13e-64LBD family protein