PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026431123.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 599aa    MW: 68712.8 Da    PI: 9.4251
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026431123.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1682.4e-2144138291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                     fY++Y+++ GF +rk++s+ ++r  +it+  fvC +eg +++  ++     ek+++++++ rtgC+a++++ +++  ++w+v++++ +HnH+++p
  XP_026431123.1  44 FYRAYGRTRGFLTRKRSSYATRRGPQITRVIFVCCCEGLHKKCVDAsdddGEKKKSRTPTMRTGCEAMIRIALNTkCNRWYVNEFKDHHNHDMVP 138
                     9**************************************999887777777888889999**************989**************9975 PP
2FAR177.42.8e-24220313291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                     fY+eY+++ GFs+rk++s+ + r  +it+  fvC +eg+++++ ++   + k++r++++ rtgC+a++++ +++ +g+w+v+ ++ +HnH+++p
  XP_026431123.1 220 FYKEYGRSRGFSTRKRSSYATGRGPQITRVIFVCRCEGFHKKQVDSsddDGKKKRNTTSMRTGCEAMIRIALNTkHGTWYVNAFKDDHNHDMVP 313
                     9****************************************99888777889999******************99***************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 599 aa     Download sequence    
MNVSDYDNSS GKRTSPIEMT ATLKAGSVPT LNMEFQSIEE AGAFYRAYGR TRGFLTRKRS  60
SYATRRGPQI TRVIFVCCCE GLHKKCVDAS DDDGEKKKSR TPTMRTGCEA MIRIALNTKC  120
NRWYVNEFKD HHNHDMVPPR KQVSIKSDKV FPPATTNLAE ASSTHTLQVE KVASLFGENS  180
EMTITSDVGS VHNEMTTNFE VESVPSLDME FNSIEKAGAF YKEYGRSRGF STRKRSSYAT  240
GRGPQITRVI FVCRCEGFHK KQVDSSDDDG KKKRNTTSMR TGCEAMIRIA LNTKHGTWYV  300
NAFKDDHNHD MVPPEERVLM KLNKVFPSAP RNLAQAPSKR KLQVRKIAPL FEDNEHIEST  360
PRDVYNNLRT IRESLIEVRD AEAVMIYFRK RTIENPGFYY AVQEDEEGRA SSFFWVDALS  420
RIAYSRFGDA VTFDTTYKTN KYSMPFAPFT GANHHHQSVT FGFALLGDET EETFKWLFKT  480
WLEAMGGNPP ISILTDQDQV MTSAIAAVFP NSRHRFCSWH IKKKFGEKLS HVFYKKSKFK  540
KTVKAVTRFT YTTQDFESQW EAMLKEFGLV ENIWLHDLFE IREKWTPAYN RGTFFAGMN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-88FAR1 family protein