PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026431116.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 497aa MW: 54830 Da PI: 8.0871

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026431116.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	43.1	1.1e-13	124	211	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +Li+a e+ +l+rg+lk+++W++v++ + ++ +++ +qCk++++ l+k+yk +k+ ++ + ss++ ++++l+ XP_026431116.1 124 CWSEGATSTLIDAWGERYLELSRGNLKQKHWKDVADIVtsrdDYTKSSKTDVQCKNRIDTLKKKYKIEKNKISD--TGFSSKWCFYERLD 211 7***********************************85444445566678************999998..58999*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MEVEEDEIES HHPSQSQSQS PSLTSSRSPP PSPTTYHPQA PPLPQQPEPE PPLSQSPSPI 60 SSIQPQSHQQ QKQEQPDSPP PTTPPPPQTL TLALPIQQSP LATTTSTPPP PATTQHHSHG 120 REDCWSEGAT STLIDAWGER YLELSRGNLK QKHWKDVADI VTSRDDYTKS SKTDVQCKNR 180 IDTLKKKYKI EKNKISDTGF SSKWCFYERL DHLIGPHSAS AAANNNSNST SNKHVNTPVP 240 SSTTPAPIQF HNLSGSGSGG GGGGGGGSGK VPLAVPIHLV RYDHPSLNLN LNHHQQHYQQ 300 QQQQRQQRGQ PSKNAGYVDT DSSGEEPVYD DESPDSTDSL PPETDYVRKR PRLFARRACP 360 TPSTNSMPVR GDSASGGGGS FRGEKNRSSA KKRSRSSNGG DSGNWKNSIM ELTRAIVKFG 420 EAYEQIETSK LQQVVEMEQQ RMEFMKELEL QRMQFFMKTQ VDLSQVKHGR RGGNSRRHNN 480 NNSNNHNNNI DNGDNSG

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MEVEEDEIES HHPSQSQSQS PSLTSSRSPP PSPTTYHPQA PPLPQQPEPE PPLSQSPSPI  60
SSIQPQSHQQ QKQEQPDSPP PTTPPPPQTL TLALPIQQSP LATTTSTPPP PATTQHHSHG  120
REDCWSEGAT STLIDAWGER YLELSRGNLK QKHWKDVADI VTSRDDYTKS SKTDVQCKNR  180
IDTLKKKYKI EKNKISDTGF SSKWCFYERL DHLIGPHSAS AAANNNSNST SNKHVNTPVP  240
SSTTPAPIQF HNLSGSGSGG GGGGGGGSGK VPLAVPIHLV RYDHPSLNLN LNHHQQHYQQ  300
QQQQRQQRGQ PSKNAGYVDT DSSGEEPVYD DESPDSTDSL PPETDYVRKR PRLFARRACP  360
TPSTNSMPVR GDSASGGGGS FRGEKNRSSA KKRSRSSNGG DSGNWKNSIM ELTRAIVKFG  420
EAYEQIETSK LQQVVEMEQQ RMEFMKELEL QRMQFFMKTQ VDLSQVKHGR RGGNSRRHNN  480
NNSNNHNNNI DNGDNSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	1e-39	Trihelix family protein