PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026430124.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 511aa MW: 57609.1 Da PI: 9.6487

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026430124.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.1	9.4e-21	26	120	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 fY++Y+++ GF ++k++s+ ++r +it+ fvC +eg +++ ++ e++++++++ rtgC+a++++ +++ ++w+v++++ +HnH+++p XP_026430124.1 26 FYRAYGRSRGFLTCKRSSYATRRGPQITRVIFVCCCEGLHKKCVDAsdddGENKKNRTSTMRTGCEAMIRIALNTkCNTWYVNEFKDHHNHDIVP 120 9************************************9998877777667778888899*********989************9875 PP
2	FAR1	74.1	2.9e-23	202	295	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 fY++Y+++ GFs+rk++s+ + r +it+ fvC +eg ++++ ++ + k++r++++ rtgC+a++++ +++ +g w+v+ ++ +HnH+++p XP_026430124.1 202 FYKQYGRTRGFSTRKRSSYATVRGPQITRVIFVCRCEGIHKKQVDSsddDGKKKRNTTSMRTGCEAMVRIALHTkHGMWYVNAFKDDHNHDMVP 295 9************************************9999888777889999*************999*************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MTATLKAGSV PSLNMEFQST EEAGGFYRAY GRSRGFLTCK RSSYATRRGP QITRVIFVCC 60 CEGLHKKCVD ASDDDGENKK NRTSTMRTGC EAMIRIALNT KCNTWYVNEF KDHHNHDIVP 120 PRKQVSIKSD KVFPPATTNL PEASSKHTLQ VGNVASLFGD NSEMTATSEV GSVHNEMTTN 180 FDVESVPSLD MEFNSIKEAG AFYKQYGRTR GFSTRKRSSY ATVRGPQITR VIFVCRCEGI 240 HKKQVDSSDD DGKKKRNTTS MRTGCEAMVR IALHTKHGMW YVNAFKDDHN HDMVPPEGGV 300 LMKSNKVFPS APRNLAQAPS KRRLQVRKVA PLFGDNENIE STPRNVYNHL RIIRGSLIEV 360 RDAEAVMIYF RKRTVENPGF YYAVQVDEEG RASSFFFWVD ARSRIAYSRF GDAVTFDSTF 420 KTNKYSMPFA SFTGTNHHHQ SVTFGFALLG DETEKTFNWL FKTWLEAMGG NPPISILTDQ 480 DQAMTSAIAT VFPSSRHVFV HGILRRSLER S

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MTATLKAGSV PSLNMEFQST EEAGGFYRAY GRSRGFLTCK RSSYATRRGP QITRVIFVCC  60
CEGLHKKCVD ASDDDGENKK NRTSTMRTGC EAMIRIALNT KCNTWYVNEF KDHHNHDIVP  120
PRKQVSIKSD KVFPPATTNL PEASSKHTLQ VGNVASLFGD NSEMTATSEV GSVHNEMTTN  180
FDVESVPSLD MEFNSIKEAG AFYKQYGRTR GFSTRKRSSY ATVRGPQITR VIFVCRCEGI  240
HKKQVDSSDD DGKKKRNTTS MRTGCEAMVR IALHTKHGMW YVNAFKDDHN HDMVPPEGGV  300
LMKSNKVFPS APRNLAQAPS KRRLQVRKVA PLFGDNENIE STPRNVYNHL RIIRGSLIEV  360
RDAEAVMIYF RKRTVENPGF YYAVQVDEEG RASSFFFWVD ARSRIAYSRF GDAVTFDSTF  420
KTNKYSMPFA SFTGTNHHHQ SVTFGFALLG DETEKTFNWL FKTWLEAMGG NPPISILTDQ  480
DQAMTSAIAT VFPSSRHVFV HGILRRSLER S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	1e-60	FAR1 family protein