PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026429803.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 266aa    MW: 30241.3 Da    PI: 4.684
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026429803.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26091.69.7e-29794187
          DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqql 87
                    +C aCk+lrrkC ++Cv+apyf++eq + +fa++hk+FGasnv+kl+ +lp  +r +a+ ++ ye++ar+rdPv +  + +++l+ q 
  XP_026429803.1  7 PCGACKFLRRKCLRGCVFAPYFCHEQgATHFAAIHKVFGASNVSKLIIHLPLGDRCEAAVTISYEGQARIRDPVVSLQEQLTTLKAQQ 94
                    7*************************89**********************************************99999888888764 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MTGFGSPCGA CKFLRRKCLR GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLIIHLPLGD  60
RCEAAVTISY EGQARIRDPV VSLQEQLTTL KAQQVAHCFV NEGNITTSTN DHIHQHDNHN  120
KLFYGDFPTT YPQDIEALYM QLNESKISSK QLYQNNTSMN DSNSTATTDD ENIFYYENGV  180
VNMENSPSNQ VSQEYDDPES FTPPEEAIHQ FMTSSSFDEQ YSFDEHQHAE MASLKLDVQM  240
DSRNWTFQET NQVDLQSMDF AYLQHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.15e-47LBD family protein