PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026429800.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 272aa    MW: 30575.8 Da    PI: 5.2188
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026429800.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260122.81.8e-3871071100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+++Cv+apyf +eq + +fa++hk+FGasnv+kll++lp  +r +a+ ++ yeA+ar++dPvyG+v++i++lqqq+ +l++++
  XP_026429800.1   7 PCGACKFLRRKCVRGCVFAPYFSHEQgATHFAAIHKVFGASNVSKLLSHLPLGDRCEAAVTISYEAQARIQDPVYGCVSHIFALQQQVVSLQQQI 101
                     7*************************89******************************************************************9 PP

          DUF260  95 allkee 100
                      +l+++
  XP_026429800.1 102 TTLRAQ 107
                     998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MTGFGSPCGA CKFLRRKCVR GCVFAPYFSH EQGATHFAAI HKVFGASNVS KLLSHLPLGD  60
RCEAAVTISY EAQARIQDPV YGCVSHIFAL QQQVVSLQQQ ITTLRAQQAA QGFINGGNIT  120
TSTNDHIHPH DNHNKLFYGD FPPTYPQDIE ALYMQLNESK ILSEQLHQNN TSMNDSNSTA  180
TTDDENILYY ENGVVNMENS LPESFTPPEE TVHQFMTSAS FDEQYSSDEH HQQAAMASQY  240
LDDMQINARK WTFQDTNQVD LQSMAFAYFQ HS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.16e-56LBD family protein