PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026429632.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 455aa MW: 52330.7 Da PI: 6.8286

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026429632.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.7	1.6e-07	96	176	24	90
FAR1 24 rngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 g+ t+ t+ C + g ++++kk t+++r+++ ++++gC +lk + d+kw+v+ eHnH+l XP_026429632.1 96 VPGRKTRITLGCERGGVFRHHTKKnqallefpnrtlalTVRSRKHTGTKKCGCPFTLKGVWQPDDKWKVKVECGEHNHALE 176 56778999*****97666666669********9***************99999**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MEENSPMEVE TGGDIELFDP RKAYCATSLQ NWGEEEDVLV NPEHEERAKE VLKIDMADQF 60 VTDQVFNTRD EMIAWCQDVG RQNHMIVVFA KSEKAVPGRK TRITLGCERG GVFRHHTKKN 120 QALLEFPNRT LALTVRSRKH TGTKKCGCPF TLKGVWQPDD KWKVKVECGE HNHALESTVV 180 GRSFAGRLRD DEKQLLKDMI RSGLEPNEVL TTLKKTSKGA NKSTMRTIYN ARAHLRITEM 240 EGRSEMQQVM KLLEEYHYVE WHIKDEETDE VQDIIWSHPD SIQLAKSFPS VLMINSTYRT 300 SRYHMPLSEI IRVSSTGKTF TVAFLFMKAE IKERYTWALI QLKAIYEPNA LPSVFVTSGV 360 DALVSAIKTV FPKADHILCT FQISRTIMVS CKHEFHNNEY SGSFLKDLEN LMQSETPVAF 420 DEGFASFESK WINYPTCVQY LRDNWLGLKE HFVSA

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MEENSPMEVE TGGDIELFDP RKAYCATSLQ NWGEEEDVLV NPEHEERAKE VLKIDMADQF  60
VTDQVFNTRD EMIAWCQDVG RQNHMIVVFA KSEKAVPGRK TRITLGCERG GVFRHHTKKN  120
QALLEFPNRT LALTVRSRKH TGTKKCGCPF TLKGVWQPDD KWKVKVECGE HNHALESTVV  180
GRSFAGRLRD DEKQLLKDMI RSGLEPNEVL TTLKKTSKGA NKSTMRTIYN ARAHLRITEM  240
EGRSEMQQVM KLLEEYHYVE WHIKDEETDE VQDIIWSHPD SIQLAKSFPS VLMINSTYRT  300
SRYHMPLSEI IRVSSTGKTF TVAFLFMKAE IKERYTWALI QLKAIYEPNA LPSVFVTSGV  360
DALVSAIKTV FPKADHILCT FQISRTIMVS CKHEFHNNEY SGSFLKDLEN LMQSETPVAF  420
DEGFASFESK WINYPTCVQY LRDNWLGLKE HFVSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-16	FAR1 family protein