PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026428908.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 779aa MW: 90800.8 Da PI: 6.9924

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026428908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	47.4	6.4e-15	46	129	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY++YA +GF ++++skk +g + t++C ++gk+++++++ + ++ +++Ckakl + + kw++t ++ eH+H XP_026428908.1 46 EFYRKYAAATGFGCKTRSSKKD--EGILRHVTYTCVRNGKHKTTSTT---PFELDPTGKCECKAKLSAILGVNLKWRITVFVPEHTHMT 129 6***********99998887..9999**********99877...8889999****************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 779 aa Download sequence
MDNDVGSKEN DFGLVETPNE DGRNRKCDIV VPKVGMEFDE VEEVYEFYRK YAAATGFGCK 60 TRSSKKDEGI LRHVTYTCVR NGKHKTTSTT PFELDPTGKC ECKAKLSAIL GVNLKWRITV 120 FVPEHTHMTS PSKTRFMRCN KLIKKSVKRK ILINDKAGLE MYKNFNICAA EAGGVEYLTY 180 DEKXLRNMVA KEKRLKLGEG DATALINYFE RMQNLNEDFF YRIDLGDDGR LRNVFWADKR 240 CREAYKEFGE VVTFDTTYLT NKYAMPFAPF VGVNHXGQST LFGCGLISNE EIDTFVWLFQ 300 AWLDCMKGSA PQAILTDQCS SMKAAVERVF PHAKHRWCLW HIMKKIPEKL SSHKKYQNIK 360 CRLKRAVYDT TSPTEFDQSW SEMLEKYPKL RSSRWLNTLY TEKHHWVPCY VNTTFWAGMS 420 TTQRSESMNA FFDGYVHSRT TLSEFVEQYD NALRSKVEKE LKADARYFSK VIPTTTSYEI 480 EEQMQNVYTI EKFQEIQKEL TKKIYCEIID VQDEIQDGIQ VTRYDVQQEI WYYRLPFVED 540 EDGNSTDEDA TAAAGSDQED IVEVNNIPTV EEGEEDEHNP KAKKVMKHVV FKVWYEKDEC 600 KVKCSCCMFE FRGLLCTHAL YVLLRNKVTS IPERYILRRW RKDVKLAHSK VSLSSDSWQL 660 TPEEKRYKEL CDYFAELVDI ASRDDDECND IKKWIGEQLK LVTEKVPNTA KEVIHTEVNN 720 VIEVQNPRVV PTKGRPCKNT SKPKVLQEVP TQQNIMSTVQ TRNINPIHEQ YHQYQFEII

Sequence ? help Back to Top

Protein Sequence Length: 779 aa Download sequence

MDNDVGSKEN DFGLVETPNE DGRNRKCDIV VPKVGMEFDE VEEVYEFYRK YAAATGFGCK  60
TRSSKKDEGI LRHVTYTCVR NGKHKTTSTT PFELDPTGKC ECKAKLSAIL GVNLKWRITV  120
FVPEHTHMTS PSKTRFMRCN KLIKKSVKRK ILINDKAGLE MYKNFNICAA EAGGVEYLTY  180
DEKXLRNMVA KEKRLKLGEG DATALINYFE RMQNLNEDFF YRIDLGDDGR LRNVFWADKR  240
CREAYKEFGE VVTFDTTYLT NKYAMPFAPF VGVNHXGQST LFGCGLISNE EIDTFVWLFQ  300
AWLDCMKGSA PQAILTDQCS SMKAAVERVF PHAKHRWCLW HIMKKIPEKL SSHKKYQNIK  360
CRLKRAVYDT TSPTEFDQSW SEMLEKYPKL RSSRWLNTLY TEKHHWVPCY VNTTFWAGMS  420
TTQRSESMNA FFDGYVHSRT TLSEFVEQYD NALRSKVEKE LKADARYFSK VIPTTTSYEI  480
EEQMQNVYTI EKFQEIQKEL TKKIYCEIID VQDEIQDGIQ VTRYDVQQEI WYYRLPFVED  540
EDGNSTDEDA TAAAGSDQED IVEVNNIPTV EEGEEDEHNP KAKKVMKHVV FKVWYEKDEC  600
KVKCSCCMFE FRGLLCTHAL YVLLRNKVTS IPERYILRRW RKDVKLAHSK VSLSSDSWQL  660
TPEEKRYKEL CDYFAELVDI ASRDDDECND IKKWIGEQLK LVTEKVPNTA KEVIHTEVNN  720
VIEVQNPRVV PTKGRPCKNT SKPKVLQEVP TQQNIMSTVQ TRNINPIHEQ YHQYQFEII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-99	FAR1 family protein