PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026428803.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

G2-like

Protein Properties

Length: 505aa MW: 58269 Da PI: 6.4248

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026428803.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98	6.9e-31	131	184	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt++LH+ F+++ve+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+ XP_026428803.1 131 PRLRWTSDLHHYFIHCVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 184 8****************************************************7 PP
2	Myb_DNA-binding	44	5.1e-14	132	183	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT +++ ++++v++lGg t+k++ + m+ kg++ ++ks++q+y+ XP_026428803.1 132 RLRWTSDLHHYFIHCVERLGGQeraTPKLVLQLMNvKGLSIAHVKSHLQMYR 183 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MVTDQQREEQ ICEDENQNSS SWSDNQVLLQ VTSATTSPPP RRGKKRSLSP CFDLNEDAMM 60 MSTDINDQMV NTIDQEEEDD ENNDSMTREN SLSSSNNNSE ANNNNNAVET GSCSDRTTTT 120 TVRQYVRSKM PRLRWTSDLH HYFIHCVERL GGQERATPKL VLQLMNVKGL SIAHVKSHLQ 180 MYRSKKLDEC GQVLSQTNMQ GGHDQMYYHH HRTSHSQQQP FRIDNYKNFV QAQNMHDTLP 240 NHLQYPLSQQ QQFDHRDSCY PRHQEWGFSQ NNHRMKPIPV QAADKGIGIE QASHGMKISS 300 HLFDLRNAIS WNGPIRPNRF LEEKKWPPRQ MMTSVNTMSS LSLELNNDNN TDKRFRSDSN 360 YHRISSNSFQ HPQFGLDKLT TVLAKERRDE MVENIDIMSS SCMGDKREQE CIPNLQLSLS 420 PNQQNSDDFF NNNNNSELES STITRTKDQI NTALCLSLFP TNEETNEQQQ QQQHTDRNSS 480 TSNLWCLQRN SCSSNNNNQQ ASVRG

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MVTDQQREEQ ICEDENQNSS SWSDNQVLLQ VTSATTSPPP RRGKKRSLSP CFDLNEDAMM  60
MSTDINDQMV NTIDQEEEDD ENNDSMTREN SLSSSNNNSE ANNNNNAVET GSCSDRTTTT  120
TVRQYVRSKM PRLRWTSDLH HYFIHCVERL GGQERATPKL VLQLMNVKGL SIAHVKSHLQ  180
MYRSKKLDEC GQVLSQTNMQ GGHDQMYYHH HRTSHSQQQP FRIDNYKNFV QAQNMHDTLP  240
NHLQYPLSQQ QQFDHRDSCY PRHQEWGFSQ NNHRMKPIPV QAADKGIGIE QASHGMKISS  300
HLFDLRNAIS WNGPIRPNRF LEEKKWPPRQ MMTSVNTMSS LSLELNNDNN TDKRFRSDSN  360
YHRISSNSFQ HPQFGLDKLT TVLAKERRDE MVENIDIMSS SCMGDKREQE CIPNLQLSLS  420
PNQQNSDDFF NNNNNSELES STITRTKDQI NTALCLSLFP TNEETNEQQQ QQQHTDRNSS  480
TSNLWCLQRN SCSSNNNNQQ ASVRG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	41	47	RRGKKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-33	G2-like family protein