PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026428735.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | LBD | ||||||||
Protein Properties | Length: 172aa MW: 18977.1 Da PI: 8.7571 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 129.5 | 1.4e-40 | 26 | 125 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lr +C ++Cvlapyfp ++p kf +h++FGasn++k+l++lpe++r da+ss+vyeA+ r+r PvyG++g+i +lq+q++ l+a+la XP_026428735.1 26 PCAACKILRGRCGEKCVLAPYFPPTEPLKFTTAHRVFGASNITKMLQELPESQRVDAVSSMVYEANSRVRHPVYGCAGTIYQLQKQVSDLQAQLA 120 7********************************************************************************************** PP DUF260 96 llkee 100 + ++e XP_026428735.1 121 KSQAE 125 99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
RAMTPMSCTN PNSIPAPSLP QVVITPCAAC KILRGRCGEK CVLAPYFPPT EPLKFTTAHR 60 VFGASNITKM LQELPESQRV DAVSSMVYEA NSRVRHPVYG CAGTIYQLQK QVSDLQAQLA 120 KSQAEIINVR SHQNSKILAV LCFLRLRYAL EESNPSSPSA LLIINCFELF SH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 3e-63 | LBD family protein |