PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026428734.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 198aa    MW: 21840.7 Da    PI: 5.2391
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026428734.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260134.15.3e-42291281100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+C ++C+lapyfp ++p kf  +h++FGasn++k+l+++pe++r da+ss+vyeA+ r+rdPvyG++g+i +lq+q++ l+a+la
  XP_026428734.1  29 PCAACKILRRRCGEKCILAPYFPPTEPLKFTTAHRVFGASNITKMLQEIPESQRVDAVSSMVYEANSRIRDPVYGCAGTIYQLQKQVSDLQAQLA 123
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     + ++e
  XP_026428734.1 124 KSQAE 128
                     99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MGSSTDTSMA TNIHTQSPAP SLSQVVVTPC AACKILRRRC GEKCILAPYF PPTEPLKFTT  60
AHRVFGASNI TKMLQEIPES QRVDAVSSMV YEANSRIRDP VYGCAGTIYQ LQKQVSDLQA  120
QLAKSQAEII SMQCQQAHFE GPLCMEMKQS SLSSLQQDID DFMSNKISTQ SSSPDNNFDG  180
LRFGEANTCS EWEPSLWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.11e-65LBD family protein