PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026428729.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 263aa    MW: 29462.3 Da    PI: 5.2323
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026428729.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260128.62.8e-40291281100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+C ++Cvlapyfp ++p kf  +h++FGasn++k+l++lpe++r da+ss+vyeA  r++dPvyG++g+i +lq+q+  l+++la
  XP_026428729.1  29 PCAACKILRRRCGEKCVLAPYFPPTEPLKFTTAHRVFGASNIIKMLQELPESQRVDAVSSMVYEAYSRVKDPVYGCAGTIYQLQKQVIDLQVQLA 123
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     + ++e
  XP_026428729.1 124 KSQAE 128
                     99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MGSSTDTSIA TNIHTQSPAP SLSQVVLTPC AACKILRRRC GEKCVLAPYF PPTEPLKFTT  60
AHRVFGASNI IKMLQELPES QRVDAVSSMV YEAYSRVKDP VYGCAGTIYQ LQKQVIDLQV  120
QLAKSQAEVI SMQCQQAQFV DPLCMEMKQH SRYQQQQQQP TATTISLASS LSSLRLQQDI  180
DDFMMSNAIT TQYQQQQQQP TTSTIFPTSS SLSSLEQEYI DDFLSNNIIT QSSSLDNNFD  240
GLIFGHANMG LEWNHPYEHY LLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.11e-64LBD family protein