PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026428726.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 204aa MW: 22891.3 Da PI: 7.3889 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 128.3 | 3.4e-40 | 37 | 136 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lr++C ++C+lapyfp + p kf +h++FGasn++k+l++lpe++r da+s +vyeA+ r+rdPvyG++g+i +lq+q+ l+a+la XP_026428726.1 37 PCAACKILRQRCGEKCILAPYFPPTGPLKFTTAHRVFGASNITKMLQELPESQRVDAVSNMVYEANSRIRDPVYGCAGTIYQLQKQVTDLQAQLA 131 7********************************************************************************************** PP DUF260 96 llkee 100 + ++e XP_026428726.1 132 KSHAE 136 99987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 204 aa Download sequence |
MLYNGIFEWV HQLIPPLPPN IYTQSPAPSL SQVVVTPCAA CKILRQRCGE KCILAPYFPP 60 TGPLKFTTAH RVFGASNITK MLQELPESQR VDAVSNMVYE ANSRIRDPVY GCAGTIYQLQ 120 KQVTDLQAQL AKSHAEIISM QCQQAHFVGP LCMEMKQHSQ YQQQQQQPTT TPMSLTSSLS 180 SLQLQQDVDD FMMSNTVTTQ IQQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G07900.1 | 2e-62 | LBD family protein |