PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026428671.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 431aa MW: 50231.9 Da PI: 7.0311

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026428671.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.7	6.1e-26	92	181	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrn.geitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn++A ++GFs+r ++++ks+ + e++ rtf+Cs++g r+++ k e+++r+ra rt+Ck +++k++ +++w v+++++eHnH+l+ XP_026428671.1 92 DFYNRFAGNIGFSIRSHSTNKSRVEpFEVIGRTFCCSRQGLRDPRAKPVEQRKRQRADVRTNCKEVMMIKRK-KDRWIVSRIVEEHNHKLV 181 6*****************99654269***************************************9.9*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MGGLGFTPSQ KPETHDFQVE SLYMSEDGEE IFDEETYIED IDNLDILDRE ENDDFQDEVI 60 AANDVKQLTE EELNHIRPYV GKEFDSQEDV YDFYNRFAGN IGFSIRSHST NKSRVEPFEV 120 IGRTFCCSRQ GLRDPRAKPV EQRKRQRADV RTNCKEVMMI KRKKDRWIVS RIVEEHNHKL 180 VSPSKRHILR SLRILNDSQK QTITNYRLAG VKTNQMIDYL AVEHGGVANV GFLSKDARNY 240 LITRRQLELK HGDAQAVLDY FQRQQMKNPS FFYSIQVDSQ GQMTNFFWSD DKSRMDYLYF 300 RDVVCFDPTY STNRYDMPFV PIVGINHHHQ TVIFGGALLY SESEESFAWV MKTWMRAMHG 360 KTPKVILTGQ ESAIGGAIAR VLPGARHIYC LWHISRNAMK NLSNVTKEFV SDFSNCLWLQ 420 GEKLKIVWIT K

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MGGLGFTPSQ KPETHDFQVE SLYMSEDGEE IFDEETYIED IDNLDILDRE ENDDFQDEVI  60
AANDVKQLTE EELNHIRPYV GKEFDSQEDV YDFYNRFAGN IGFSIRSHST NKSRVEPFEV  120
IGRTFCCSRQ GLRDPRAKPV EQRKRQRADV RTNCKEVMMI KRKKDRWIVS RIVEEHNHKL  180
VSPSKRHILR SLRILNDSQK QTITNYRLAG VKTNQMIDYL AVEHGGVANV GFLSKDARNY  240
LITRRQLELK HGDAQAVLDY FQRQQMKNPS FFYSIQVDSQ GQMTNFFWSD DKSRMDYLYF  300
RDVVCFDPTY STNRYDMPFV PIVGINHHHQ TVIFGGALLY SESEESFAWV MKTWMRAMHG  360
KTPKVILTGQ ESAIGGAIAR VLPGARHIYC LWHISRNAMK NLSNVTKEFV SDFSNCLWLQ  420
GEKLKIVWIT K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	143	164	RKRQRADVRTNCKEVMMIKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-83	FAR1 family protein