PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026428442.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family Trihelix
Protein Properties Length: 277aa    MW: 33442.7 Da    PI: 8.1028
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026428442.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix74.81.4e-2333115186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W+ qe+++ + +r e+++++ ++k++k lWe +s+km+e+g+ rs+ qCk+kw+nl +ryk ++++e +     ++++p++++l+
  XP_026428442.1  33 QWSFQETKEFLVIRAELDQTFMETKRNKLLWEVISNKMKEKGYLRSSDQCKCKWKNLVTRYKGCETIEPES---MRQQFPFYNELQ 115
                     7********************************************************************84...45589****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MEGGHHHQHQ QQQQQQQHHS MTSMEQGDSR VPQWSFQETK EFLVIRAELD QTFMETKRNK  60
LLWEVISNKM KEKGYLRSSD QCKCKWKNLV TRYKGCETIE PESMRQQFPF YNELQTIFSA  120
RMQRMLWLEA EGGPISSGMR KKGSRLSSDD DDDNEESDEE KLVVKKKMRK GKGASTTSTS  180
AGNADNSNLQ HILEEFMRQQ VQMEAQWRET VEFREKERRM REMEWRQRME ELEKERLLMD  240
RNWREREEQR RMREEARAEK RDALITALLN KLRREDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.11e-59Trihelix family protein