PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026428379.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 274aa MW: 31477.2 Da PI: 8.3613

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026428379.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	37.7	6.5e-12	22	108	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++ A+++ F + ks+ kk+ gei ++tf+C + gk +++ +k ++++t+++ a++++++++ ++++k++l nH+l+p XP_026428379.1 22 EFYKKIAQRTVFPIMKSSIKKN-ILGEIRSYTFTCARAGKCDNTGEK---PLDPQVTTKCQFPARIMIQLDTLVGYVISKVDLVYNHPLNP 108 6**************99998.9999*********9998877...89999*******************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MEVDQKIPQL GMKFKSTTDA YEFYKKIAQR TVFPIMKSSI KKNILGEIRS YTFTCARAGK 60 CDNTGEKPLD PQVTTKCQFP ARIMIQLDTL VGYVISKVDL VYNHPLNPDD SRFFLCNRYI 120 SAHVMNQIDL FDRAGVRVNK VYNICRNEHG GPENMTCTPK DCINMVDKLR RIRLGEGDAA 180 AILKYFAKMS MQNSGFYYKV DLDNDGYLDK VFWADGRYRE AYKEFGEVIS FDTTYLVNKY 240 NMLFAPFVGV NHHGQSILFG CGLVSHEDKD SFAW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-38	FAR1 family protein