PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026428377.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 369aa MW: 42120.5 Da PI: 8.9152

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026428377.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.7	3.3e-07	81	164	15	90
FAR1 15 rkskskks..krngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++s+ + ng+ + +++C ++gk+++++ k t++++r+ + +++C +l+ + +k gkw++ HnH+l+ XP_026428377.1 81 ICKSSQMKdtLGNGQGSRVQLCCERSGKHTSHRAKsyvpktTTTKKRKCGSVKCNCPFRLNGSCDKYGKWKLRVGCGYHNHPLS 164 44443333236788899**********9999888999877777777778888888888888889**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MTYCGNQESN ILDVTGNQES QVFESTSLPC NEEPNPIPEL LVSSEQPYFT QHFLKREGFG 60 TREELQAWCV SIGKAHNFQI ICKSSQMKDT LGNGQGSRVQ LCCERSGKHT SHRAKSYVPK 120 TTTTKKRKCG SVKCNCPFRL NGSCDKYGKW KLRVGCGYHN HPLSTTLVGH GYAGRLEEKE 180 KLEVEKLTNS GSRPWEILTN IKIDNPKNCS TMRAIYNARR KFKICAMQGR SMMQHFYKLA 240 LEHHYTVEYK YDPMTKKVTD LFFAHPVSVK LAQCFHEFLL LDCTYKTNKY RLPLFHVVSH 300 TSTGATFTVA VAFMSREKEA NYICALECVK RLYRGNEIPS VFVTDCEVGL IKAIDYVFPI 360 HLIFFAHGI

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MTYCGNQESN ILDVTGNQES QVFESTSLPC NEEPNPIPEL LVSSEQPYFT QHFLKREGFG  60
TREELQAWCV SIGKAHNFQI ICKSSQMKDT LGNGQGSRVQ LCCERSGKHT SHRAKSYVPK  120
TTTTKKRKCG SVKCNCPFRL NGSCDKYGKW KLRVGCGYHN HPLSTTLVGH GYAGRLEEKE  180
KLEVEKLTNS GSRPWEILTN IKIDNPKNCS TMRAIYNARR KFKICAMQGR SMMQHFYKLA  240
LEHHYTVEYK YDPMTKKVTD LFFAHPVSVK LAQCFHEFLL LDCTYKTNKY RLPLFHVVSH  300
TSTGATFTVA VAFMSREKEA NYICALECVK RLYRGNEIPS VFVTDCEVGL IKAIDYVFPI  360
HLIFFAHGI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	119	128	PKTTTTKKRK
2	125	151	KKRKCGSVKCNCPFRLNGSCDKYGKWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	8e-08	FAR1 family protein